So anyway: BiRank & QuadRank: single-cache-miss rank queries that are double the throughput of other Rust crates and fully saturate the memory bandwidth. Side effect: QuadFm is smaller and 2-4x faster than the next-best FM-index. github.com/RagnarGrootK... raw.githubusercontent.com/RagnarGrootK...
github.comGitHub - RagnarGrootKoerkamp/quadrank: Single-cache-miss rank queries over size 2 and 4 alphabets. 2x faster than all other Rust crates.Single-cache-miss rank queries over size 2 and 4 alphabets. 2x faster than all other Rust crates. - RagnarGrootKoerkamp/quadrank
Submitting to arxiv is significantly harder than biorxiv... Hard-to-understand latex errors; issues with code highlighting; re-uploading files 20x; now an abstract that's too long. If not for my server being down, you'd be able to read this already :/