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🔬 Erin Weisbart (@broadinstitute.org) presents an end-to-end Nextflow pipeline for pooled Cell Painting, built with @seqera.io. It links 9 image analysis pipelines, with automated QC at each step and gates before the costly final steps. hubs.la/Q04zg59d0 #NextflowSummit

🧪 Mark Liddell & Joe Reynolds share how @unileveruki.bsky.social productionized BIPODE, a Bayesian method for toxicology points of departure, with Nextflow: 9,600 VM hours in 48 hrs on spot instances. Partners reproduced results with only the docs. hubs.la/Q04zg1hq0 #NextflowSummit

🎯 Which cell types depend most on a drug target? Diego Marques Coelho (UFRN) presents NetPerturb, a scalable, reproducible Nextflow pipeline for GRN inference and in-silico perturbation scoring in scRNA-seq data, using existing data alone. hubs.la/Q04zg4Nq0 #NextflowSummit