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... for idx, mol in enumerate(tqdm(mols, desc="Processing molecules")): interchange = ff.create_interchange(mol.to_topology()) interchange.minimize() mol.conformers[0] = interchange.positions mol.to_file(f"minimized_mol_{idx}.sdf", file_format="sdf") ```
Or you can update an existing environment: ``` mamba install -c conda-forge "openff-toolkit>=0.17" "openff-interchange>=0.4.6" "openff-nagl>=0.5.3" "openff-nagl-models>=2025.09" "openff-forcefields>=2025.10" ```
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