Post

Pathoplexus
@pathoplexus.org

1/ 🚀 Pathoplexus now supports Bundibugyo virus (BDBV), a species of Ebolavirus. BDBV has been associated with past outbreaks of Ebola in the DR Congo and Uganda, & a case has been reported today during response to the current Ebola outbreak. pathoplexus.org/ebola-bdbv #ebola #bdbv #ebolaoutbreak

Pathoplexus
@pathoplexus.org

2/ The addition of BDBV to Pathoplexus was fast-tracked by our Exec Board today, to aid data sharing when sequences are available. Pathoplexus lets sequences to be uploaded as Open (immediately public + sent to INSDC) or Restricted-Use (up to 1 year) - to encourage fast sharing.

Pathoplexus
@pathoplexus.org

3/ Sequences shared as Restricted-Use are available for all unpublished public-health uses (dashboards, reports, open analyses, website) with appropriate credit as outlined in our Data Use Terms - but their status provides protection from publication before the original submitters can publish.

Pathoplexus
@pathoplexus.org

4/ This is an ongoing outbreak of high interest, with few sequences available. In such a situation, Restricted-Use sequences are highly unlikely to be ‘background’ sequences. Please ensure you follow our Data Use Terms in preprints/publications & co-author with other submitters.

Pathoplexus
@pathoplexus.org

5/ The process of adding BDBV to Pathoplexus, from beginning technical work, to EB vote, to launch, took about 7 hours. We’re proud of our ability to be able to enable data sharing for new outbreaks in such a short time, and hope it enables rapid public health response.

1 repost5 likes

Pathoplexus
@pathoplexus.org

6/ 🙏We are grateful to everyone involved in caring for patients, testing samples, coordinating response, and sharing data. Our thoughts are with everyone impacted by the outbreak, and involved in the response efforts in DRC and Uganda.