Alexey Amunts

Alexey Amunts

@amunts.bsky.social

PI at SMART and Münster Uni | ERC grantee | 小红书 Amunts Lab

2.2K followers1.1K following364 posts

Lab hike along Shenzhen coastline and up Qiniang mountain. A weekend reset with beautiful sea views.

Alexey Amunts@amunts.bsky.social

Hiking with Kai Zhang and lab colleagues above the clouds. A nice retreat to conclude a busy week

Congratulations to Yingying Hu & Zhiwen Ye on starting labs at SMART! Yinying did a postdoc at UT Southwestern and her lab is working on embryonic development. Zhiwen did postdocs at @crick.ac.uk and University of Washington, and he is system neuroscientist working on brain sensorimotor integration.

Alexey Amunts@amunts.bsky.social

Congratulations to Qin Peng on her promotion with tenure! Qin started her Shenzhen lab in 2020 after PhD and postdoc at UCSD. Her lab studies mechanisms of nuclear mechanoadaptation. A wonderful achievement for an outstanding scientist and colleague!

0.43 Å. The highest resolution protein structure determined. Archaeal rubredoxin protein structure bridging the gap between structural biology and quantum chemistry.

Towards routine accurate electron-density studies of biological macromolecules. STRUCTURAL BIOLOGY Vol 82/9, 1044-1055 doi.org/10.1107/S205... E. Paknia, C. Flensburg, M. Leszek Chodkiewicz, R. H. Fogh, P. Keller, C. Vonrhein, C. Schulze-Briese, P. M. Dominiak, G. Bourenkov, G. Bricogneb, A. Charif

journals.iucr.orgTowards routine accurate electron-density studies of biological macromoleculesHere, we describe the determination of the highest resolution structure in the PDB at 0.43 Å resolution. Electron-density maps reveal extensive deformation electron density that is completely accounte...

SMART continues to strengthen its international ties. We welcomed @boehringerglobal.bsky.social. The delegation was led by Lamine Mbow head of Discovery Research, Scott DeWire head of Business Development and Licensing, Detlev Mennerich head of Venture Fund, Remko Bakker head of Eye Health.

Alexey Amunts@amunts.bsky.social

Pleasure to welcome Patrick Cramer to SMART and to present our research and discuss future directions. Cooperation between Max Planck Society @maxplanck.de and institutions in Shenzhen is expanding and will open new opportunities. As Patrick concluded in German, “Jedem Anfang wohnt ein Zauber inne”.

Congratulations to Qin Peng on her promotion with tenure! Qin started her Shenzhen lab in 2020 after PhD and postdoc at UCSD. Her lab studies mechanisms of nuclear mechanoadaptation. A wonderful achievement for an outstanding scientist and colleague!

Alexey Amunts@amunts.bsky.social

Welcome Ka Yang, who joins as a Junior PI after postdoc with Steven Gygi at Harvard Medical School. Ka’s group will develop chemical biology and chemoproteomics approaches to advance drug discovery. Check out the lab website: www.yangresearchgroup.org/home

The spectacular sodium channel in all its glory, by Nieng Yan’s lab. Science meets art and fashion at SMART’s public café. Which molecule would you like to see brought to life next? Our brilliant science communication and visualization teams can make it happen and share it with the community.

A sad day. Ada's pioneering work on the ribosome changed how we understand one of the central machines of life. She is a remarkable example of curiosity and boldness in pursuing questions that seemed impossible. Her scientific courage and persistence has been an inspiration.

wis-wander.weizmann.ac.ilProf. Ada Yonath, Nobel Laureate and a Model of Scientific Perseverance, Has Passed Away - Weizmann Wonder Wander - News, Features and DiscoveriesFrom pursuing an impossible dream to uncovering one of the cell’s best-kept secrets and advancing the design of improved antibiotics

Welcome Ka Yang, who joins as a Junior PI after postdoc with Steven Gygi at Harvard Medical School. Ka’s group will develop chemical biology and chemoproteomics approaches to advance drug discovery. Check out the lab website: www.yangresearchgroup.org/home

Alexey Amunts@amunts.bsky.social

Huaizong Shen joins SMART as Head of the Structural Biology Dept, after leading a lab at Westlake since 2019. His group combines structural biology and AI to advance molecular discovery, and his experience in building research capacity will be invaluable in his new role. Welcome and best of luck!

SMART International Summer School continues today with a mini symposium and happy hour. There's never been a more exciting time to study Life Sciences!

AI conference in Shanghai: a fantastic presentation of new EEG-based brain-to-robot platform, translating user’s intentions into commands for a robotic arm. By BrainCo based in Hangzhou. #AI #Robotics #Technology

Huaizong Shen joins SMART as Head of the Structural Biology Dept, after leading a lab at Westlake since 2019. His group combines structural biology and AI to advance molecular discovery, and his experience in building research capacity will be invaluable in his new role. Welcome and best of luck!

Alexey Amunts@amunts.bsky.social

Congratulations to Meidi Gu on starting her lab at SMART! Meidi brings expertise in immunotherapy developed through her postdoc with @jimriley52.bsky.social at @pennmehp.bsky.social and @mdanderson.bsky.social Her lab will focus on how membrane remodeling shapes T-cell function in diseased tissues.

Sad news about the sudden passing of Richard Neutze. A friend and pioneer of time resolved studies. His bold work on intermediates inspired many of us. His enthusiasm helped shape MAX IV in Sweden and generations of scientists all over the world. We'll miss the warm smile, curiosity and generosity.

Congratulations to Meidi Gu on starting her lab at SMART! Meidi brings expertise in immunotherapy developed through her postdoc with @jimriley52.bsky.social at @pennmehp.bsky.social and @mdanderson.bsky.social Her lab will focus on how membrane remodeling shapes T-cell function in diseased tissues.

Alexey Amunts@amunts.bsky.social

Delighted to welcome our new PI, Daxiao Sun who is starting her lab at SMART after a postdoc with @hymanlab.bsky.social @mpi-cbg.de and Alf Honigmann @biotec-tud.bsky.social Daxiao’s group will investigate how biomolecular condensates regulate cell junctions and tissue morphogenesis. Welcome!

Delighted to welcome our new PI, Daxiao Sun who is starting her lab at SMART after a postdoc with @hymanlab.bsky.social @mpi-cbg.de and Alf Honigmann @biotec-tud.bsky.social Daxiao’s group will investigate how biomolecular condensates regulate cell junctions and tissue morphogenesis. Welcome!

Alexey Amunts@amunts.bsky.social

Wei Yang joins SMART after a postdoc with David Baker @uwproteindesign.bsky.social. He designs next generation binders for immune checkpoint receptors. At SMART, Wei's team will integrate algorithm development with high-throughput experimental validation to deliver selective protein therapeutics.

It was very special Karen Davies Memorial Symposium in Nottingham. Karen’s pioneering work on ATP synthase and bioenergetic membranes shaped our field, and speakers highlighted her impact as colleague, mentor and friend. Thank you eBIC, CCPEM and all participants for making such a meaningful tribute

Alexey Amunts@amunts.bsky.social

Sad news about Karen Davies' passing. Karen was an inspiration in bioenergetics and cryoET. Her pioneering postdoctoral work on ATP synthase and respiratory supercomplexes marked turning points in the field. I created Scholar profile to acknowledge her contribution scholar.google.com/citations?hl...

The first Max Planck Center in Shenzhen. @maxplanck.de and Chinese Academy of Sciences launch a Center for Synthetic Biochemistry at Shenzhen Institute of Advanced Technology. It will leverage automated infrastructure for biomanufacturing of natural products. Germany-China partnership is growing.

Alexey Amunts@amunts.bsky.social

Pleasure to welcome Patrick Cramer to SMART and to present our research and discuss future directions. Cooperation between Max Planck Society @maxplanck.de and institutions in Shenzhen is expanding and will open new opportunities. As Patrick concluded in German, “Jedem Anfang wohnt ein Zauber inne”.

Pleasure to welcome Patrick Cramer to SMART and to present our research and discuss future directions. Cooperation between Max Planck Society @maxplanck.de and institutions in Shenzhen is expanding and will open new opportunities. As Patrick concluded in German, “Jedem Anfang wohnt ein Zauber inne”.

Since our preprint on the ETC-ATP synthase supercomplex has attracted attention, I would like to introduce the platform we used, Langtaosha. It was launched by SMART together with several other institutions with support from Open Life Science Alliance, aiming for long-term open infrastructure 1/4

Alexey Amunts@amunts.bsky.social

65 years after Peter Mitchell’s chemiosmotic theory, we report an association between ATP synthase and the electron transport chain. In the preprint led by @longzhou88.bsky.social, we describe a large supercomplex and show how the supramolecular organization contribute to oxidative phosphorylation 🧵

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So, overall, it will incorporate new technologies, and provide long term support and timely response to the growing needs of the international research community for science exchange 3/4

Since our preprint on the ETC-ATP synthase supercomplex has attracted attention, I would like to introduce the platform we used, Langtaosha. It was launched by SMART together with several other institutions with support from Open Life Science Alliance, aiming for long-term open infrastructure 1/4

Alexey Amunts@amunts.bsky.social

65 years after Peter Mitchell’s chemiosmotic theory, we report an association between ATP synthase and the electron transport chain. In the preprint led by @longzhou88.bsky.social, we describe a large supercomplex and show how the supramolecular organization contribute to oxidative phosphorylation 🧵

Langtaosha is not intended as another preprint server, but as platform that could develop across broad part of the research lifecycle including protocols, negative results, open commenting and AI-assisted review. The idea is to contribute to stable and transparent ecosystem for research exchange 2/4

In a followup with @longzhou88.bsky.social and Yue Liu we move from molecular mechanism to membrane architecture. A giant ETC-ATP synthase assembly containing 10 ATP synthases and 6 respiratory complexes builds long-range periodic OXPHOS arrays on native cristae langtaosha.org.cn/lts/en/prepr... 1/4

Alexey Amunts@amunts.bsky.social

65 years after Peter Mitchell’s chemiosmotic theory, we report an association between ATP synthase and the electron transport chain. In the preprint led by @longzhou88.bsky.social, we describe a large supercomplex and show how the supramolecular organization contribute to oxidative phosphorylation 🧵

View full thread

High-res cryo-EM structures of different pieces from such long-range array in Leishmania provide details of the interfaces involved. The findings validate the single particle prequel and shed light on the divergent bioenergetic and cristae shaping strategies employed by different discobids. 3/4

In a followup with @longzhou88.bsky.social and Yue Liu we move from molecular mechanism to membrane architecture. A giant ETC-ATP synthase assembly containing 10 ATP synthases and 6 respiratory complexes builds long-range periodic OXPHOS arrays on native cristae langtaosha.org.cn/lts/en/prepr... 1/4

Alexey Amunts@amunts.bsky.social

65 years after Peter Mitchell’s chemiosmotic theory, we report an association between ATP synthase and the electron transport chain. In the preprint led by @longzhou88.bsky.social, we describe a large supercomplex and show how the supramolecular organization contribute to oxidative phosphorylation 🧵

In situ, the ETC–ATP synthase supercomplexes sit at both ends of ATP synthase rows. Units of (CIICIV2CV)(CV2)4(CIICIV2CV) are formed to tile the discoidal crista rim with defined register. With the help of cryo-ET and STA, molecular interactions scale up into a repeating membrane architecture. 2/4

65 years after Peter Mitchell’s chemiosmotic theory, we report an association between ATP synthase and the electron transport chain. In the preprint led by @longzhou88.bsky.social, we describe a large supercomplex and show how the supramolecular organization contribute to oxidative phosphorylation 🧵

langtaosha.org.cnA Supercomplex Incorporating Both Electron Transport Chain and ATP SynthaseThe mitochondrial oxidative phosphorylation system powering most aerobic organisms is typically depicted as two spatially segregated machineries(1): electron transport chain complexes I-IV (ETC CI-CIV
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Evolutionary analysis by Martijn Huynen further suggests that this architecture emerged in lineages where canonical complex I was lost or extensively modified, pointing to a new solution for spatial organization of oxidative phosphorylation 5/6

Conceptually, this work extends Mitchell’s chemiosmotic theory. Beyond establishing proton motive force, oxidative phosphorylation depends on the geometry of the hosting membrane and the supramolecular organization that make the proton circuit optimal 6/6

65 years after Peter Mitchell’s chemiosmotic theory, we report an association between ATP synthase and the electron transport chain. In the preprint led by @longzhou88.bsky.social, we describe a large supercomplex and show how the supramolecular organization contribute to oxidative phosphorylation 🧵

langtaosha.org.cnA Supercomplex Incorporating Both Electron Transport Chain and ATP SynthaseThe mitochondrial oxidative phosphorylation system powering most aerobic organisms is typically depicted as two spatially segregated machineries(1): electron transport chain complexes I-IV (ETC CI-CIV
View full thread

Atomistic simulations by Vivek Sharma, showed induction of a shallow positive membrane curvature. By contrast, CIICIV₂ assembly lacking ATP synthase relaxed toward a flatter membrane conformation, suggesting that stable curvature is specifically sustained by incorporation of ATP synthase 3/6

Biochemical, functional, and EM analyses by the Ondřej Gahura and Hassan Hashimi labs showed that disrupting the unique g′/g″ module selectively destabilizes the supercomplex, reshapes mitochondrial cristae, and lowers maximal membrane polarization capacity 4/6

65 years after Peter Mitchell’s chemiosmotic theory, we report an association between ATP synthase and the electron transport chain. In the preprint led by @longzhou88.bsky.social, we describe a large supercomplex and show how the supramolecular organization contribute to oxidative phosphorylation 🧵

langtaosha.org.cnA Supercomplex Incorporating Both Electron Transport Chain and ATP SynthaseThe mitochondrial oxidative phosphorylation system powering most aerobic organisms is typically depicted as two spatially segregated machineries(1): electron transport chain complexes I-IV (ETC CI-CIV

CryoEM revealed 2MDa respiratory chain-ATP synthase supercomplex, organized around ATP synthase monomer together with complex II, dimer of complex IV A key organizing principle is a non-canonical subunit g′/g″ module repurposing ATP synthase dimerization interface to couple the respiratory chain 2/6

Catching the early morning low tide in Aguda on Portugal’s Atlantic coast with colleagues from Universidade de Aveiro, collecting local species for analysis. Pure curiosity and passion for science!