Amy Webster

Amy Webster

@amywebster.bsky.social

Assistant Professor of Biological Science at Florida State. epigenomics of complex traits, gene x environment interactions, and phenotyping-by-sequencing with C. elegans amykwebster.github.io

500 followers230 following10 posts

We have collected a lot of sequencing data (RNA-seq, CUT&Tag-seq) from C. elegans and related species that is ripe for analysis. I am also eager to work with a postdoc to develop their independent line of research, which can be solely computational or a combination of wet and dry lab. (2/3)

Amy Webster reposted

No contest. Just read the first two sentences of the abstract. www.nature.com/articles/s41...

Dmitri Petrov@petrovadmitri.bsky.social

All right it’s time for the annual “please tell us about one (or a few if you are ambitious) paper from 2025 that really impressed you and why we should all read it“! Go! If you tell us how it changed your view of the world and what makes it so powerful and consequential It would be excellent.

Amy Webster reposted

From nematode to Nobel: How community-shared resources fueled the rise of Caenorhabditis elegans as a research organism - a perspective written by 11 scientists, six of whom are Nobel laureates www.pnas.org/doi/10.1073/...

pnas.orgPNASProceedings of the National Academy of Sciences (PNAS), a peer reviewed journal of the National Academy of Sciences (NAS) - an authoritative source of high-impact, original research that broadly spans...

Amy Webster reposted

It was great to participate in this virtual workshop yesterday (recorded for those who missed it)! Looking forward to the rest of #worm25

Meital Oren@meital.bsky.social

C. elegans enthusiasts - join me and @stern-lab.bsky.social ‪‪for a pre #worm25 meeting online workshop on *Monitoring inter-individual diversity across multiple levels and timescales* - Jun 26, 2025 12:30 PM Eastern Time us06web.zoom.us/j/8544967372... please share!

Amy Webster reposted

NEW: NSF confirmed that they fired 168 employees today, out of their staff of ~1,500 feds. This includes some people who'd finished their 1-year probationary periods, which were extended to 2-years last month without explanation. More to come.

Amy Webster reposted

One of the coolest and most novel findings I’ve seen in years. This is why I work in worms. To find things no one even really knew to look for. Like a conserved system that splices transposons out of mRNAs to prevent otherwise lethal insertions in essential genes! - www.biorxiv.org/content/10.1...

biorxiv.orgAn RNA Splicing System that Excises Transposons from Animal mRNAsAll genomes harbor mobile genetic parasites called transposable elements (TEs). Here we describe a system, which we term SOS splicing, that protects C. elegans and human genes from DNA transposon-medi...

Amy Webster reposted

On January 6th, 1995, my (now ex) wife and I boarded a flight from Heathrow to JFK on a one way ticket. We had two suitcases and about $900 in cash - this was everything we owned and we were moving to the US. We thought it was maybe for 2-3 years. I had visited the US once, for a conference, and

Amy Webster reposted

Amy Webster reposted

In the present discussions about NIH and the need for reform, two recurring points I am seeing are: (1) NIH doesn't fund truly high impact research (2) NIH needs to experiment with alternative approaches to peer review, particularly for high risk-high impact research 1/n

Very happy to see this out! It was great to think deeply about integrating epigenetic variation into the genotype-phenotype map, from historical perspectives, to current research, to future possibilities. I hope others interested in these topics find the framework and scope of this review helpful.

Patrick Phillips@patrickphillips.bsky.social

Just out in @natrevgenet.bsky.social, led by @amywebster.bsky.social: Epigenetics and individuality: from concepts to causality across timescales. Access available via the Sharedit Initiative. rdcu.be/d5LYh

Amy Webster reposted

Amy Webster reposted

I am very excited to announce I am starting my lab as an Assistant Professor @FloridaState this week! We will be focused on understanding the basis of individual variation in complex traits using a variety of genomic approaches and primarily using C. elegans as a model.

Check out our preprint on the basis of phenotypic differences across genetically identical individuals!

Patrick Phillips@patrickphillips.bsky.social

Truly epic preprint from @amywebster.bsky.social : Epigenetic context predicts gene expression variation and reproductive traits across genetically identical individuals. www.biorxiv.org/content/10.1...

Amy Webster reposted

'Using an inbred line from a natural population with high diapause plasticity, we demonstrate that diapause is determined epigenetically: only a subset of genetically identical individuals enter diapause and this diapause plasticity is epigenetically transmitted for at least three generations'

journals.plos.orgHistone methylation regulates reproductive diapause in Drosophila melanogasterAuthor summary Fluctuating environments pose significant challenges to developing organisms. To better match the immediate, local environment, many organisms follow distinct developmental trajectories...

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