Baptiste Alberti

I'm happy to share that I just started a new postdoc at the @kiroxford.bsky.social to work within the @halloulab.bsky.social! Looking forward to analyse spatial transcriptomics and spatial mechanical data on skin tissues And lucky me, I only had to wait my second day to get this sunny pictures 😁

Only few days left to apply! This event is relevant both for wet lab biologists who want to learn more about spatial OMICs and get initiated to data analysis and for bioinformaticians who want to learn about the latests developments in spatial OMICs.

Very excited to share our latest paper, in which we developed an approach to answer a central question: Is cell fate more dependent on a cell lineage or a cell direct neighbors? Surprisingly, when analyzing single cell trajectories, we showed that C. elegans exhibit both

Are you passionate about the mathematics of data science, computational geometry and topology and want to apply your skills to a beautiful biological question? Come do a PhD with us! You will help us understand of how boundaries are established and maintained in early heart development.

Congratulations to Dr @baalberti.bsky.social !! 🎉 And many thanks to his jury members @randersson.bsky.social @arnausebe.bsky.social @olivier-gandrillon.mastodon.social.ap.brid.gy Marie Sémon Anouck Necsulea and co-supervizor @paulvilloutreix.bsky.social

Happy to share STORIES out now on Nature Methods STORIES learns cell fate landscapes from spatial tramscripromics data profiled at several time points, thus allowing prediction of future cell states. Led by Geert-Jan Huizing and Jules Samaran www.nature.com/articles/s41... @pasteur.fr

Ever wondered what drives enhancer-promoter specificity? Why would an enhancer activate one gene rather than another neighboring one? Check our latest preprint, led by @mmasoura.bsky.social, to find out! www.biorxiv.org/content/10.1...

Merci au @cnrsbiologie.bsky.social de mettre en avant notre travail! @baalberti.bsky.social @paulvilloutreix.bsky.social @igflyon.bsky.social @ensdelyon.bsky.social

🚨 Our paper is out! 🚨 Check how spatial-scERA can predict enhancer activity in a virtual Drosophila embryo. Very proud of this first step in the research world published in @narjournal.bsky.social Thanks to @yghavi.bsky.social, @paulvilloutreix.bsky.social and all the scientists who made it real!