BaCell3D

BaCell3D

@bacell3d.bsky.social

Group of Basel-based scientists interested in #stemcells & #organoids. Our ambition is to promote scientific collaboration between academia and industry by organizing a yearly conference.

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Everyone is striving to build better and more complex organoid models—but do we appreciate the importance of standardized and validated models enough? Srivatsan Kidambi introduced us to NIH’s Standardized Organoid Modeling (SOM) Center!

The center also integrates AI-driven approaches to improve data analysis, model characterization, and cross-platform comparisons, helping establish more reliable and scalable organoid systems.

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Furthermore, intestinal organoids were used to study celiac disease, revealing gliadin-induced immune activation in the stroma and providing new insights into disease mechanisms.

He also showcased the next-generation lung organoids containing epithelial, immune, and stromal compartments that can be maintained for up to 3 months. These models enable studies of SARS-CoV-2 infection and tissue-resident memory T cells, showcasing adaptive immune responses in organoids.

Particularly impressive were long-lived tumor microenvironment organoids retaining immune components, including TILs and TAMs. Fascinating data showing CD47 checkpoint inhibition increases SPP1 expression in both organoids and patients.

Ruben Lopez Sandoval presented his engineered intestine model to study host-microbe interactions. These microtissues secrete mucus and create an environment for Salmonella attachment!

Jose Silva from Guangzhou Laboratory virtually connected to BaCell3D to present his lab’s research on stem cell-based embryo models! Founder cells are key to create structures that contain heart, neural tube and even lung progenitors!

Barbara Treutlein presented her lab’s groundbreaking work on morphogen and drug screening on brain, retina and intestinal organoids! @bsse.ethz.ch

An inspiring keynote by Lorenz Studer from @mskcancercenter.bsky.social showcasing the complete journey of a cell therapy—from in vitro stem cell differentiation to clinical trials. Particularly exciting were the data demonstrating significant improvements in Parkinson’s disease symptoms!

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Furthermore, he showed that hiPSCs can be coaxed into multiple neuron subtypes by tweaking the differentiation induction signals! WNT inhibition for 2 days makes a big difference!

An inspiring keynote by Lorenz Studer from @mskcancercenter.bsky.social showcasing the complete journey of a cell therapy—from in vitro stem cell differentiation to clinical trials. Particularly exciting were the data demonstrating significant improvements in Parkinson’s disease symptoms!

Daphne Bouwens from @rwth.bsky.social presented how kidney organoids can be used to study kidney fibrosis. When combined with single-cell RNA-seq atlases across disease-mimicking conditions, organoids enable identification of molecular drivers and pathways underlying fibrotic disease.

Inspiring talk by Abdullah Khan from @ox.ac.uk on combined bone and bone marrow organoids (comBO). The model enables study of hematopoietic stem cell maintenance and offers insights into disease mechanisms in myelofibrosis and multiple myeloma!

Talk by Liliana Santos-Ferreira (@i3suporto.bsky.social) on the role of glycosylation in gastric cancer. Patient-derived organoids faithfully recapitulated therapy resistance seen in patients, with fucosylation-related pathways among the most differentially expressed.

Karolin Stumpf from @dkfz.bsky.social presented her work on bone marrow organoids in the context of AML (acute myeloid leukemia) engraftment. The model provides a powerful system to study how leukemic cells interact with and colonize the bone marrow niche.

@juliabatki.bsky.social showed that extraembryonic gut cells are eliminated during mouse development through a p53-dependent cell death and are subsequently phagocytosed by embryonic gut cells. A beautiful example of how precise cellular clearance shapes embryonic development!

Fascinating work from Carla Rosell (@bsse.ethz.ch) on pleural mesothelioma. Patient-derived organoids are enabling personalized therapy selection and showing superior tumoroid killing compared with standard chemotherapy.

Ellen Fritsche from SCAHT discussed guidelines for developing New Approach Methodologies (NAMs) for toxicology testing. She highlighted neurospheres as valuable in vitro models for studying developmental neurotoxicity as they can provide mechanistic insights without relying on animal testing.

2D cultures favor pit-like cells, while 3D organoids develop glandular features with high Wnt activity. Particularly exciting were TissUse chips combining patient-derived stomach organoids with liver tissue to reveal patient-specific responses to prodrugs—a promising step toward precision medicine.

We welcome all our participants to Basel for the 5th edition of BaCell 3D! We‘re excited for a dense three day program full of cutting-edge science and socializing 🌞

BaCell3D reposted

Super excited to be in sunny Basel for @bacell3d.bsky.social this week!🌞Feel free to come say hi at the Meet the Editors tables during tomorrow and Wednesday's coffee breaks 👋

Development@dev-journal.bsky.social

If you are attending BaCell3D (@bacell3d.bsky.social) from 22-24 June in Basel, Switzerland, Reviews Editor @ingridtsang.bsky.social will also be there. Don't forget to chat to Ingrid about @dev-journal.bsky.social and @the-node.bsky.social.

#BaCell3D #3DCellBiology #Organoids #InVitroModels #StemCells #3R #Bioengineering #NAMs #Networking #Collaboration #DiseaseModeling #NonAnimalModels #InVitro #Organoid #OoC #OrganOnChip #NewApproachMethodologies #MPS #MicrophysiologicalSystems #Assembloids #Tumoroids #LifeSciences#BiomedicalResearch

#organoids #stemcells #invitromodels #NAMs #3R #3DBiology #CellCulture #TissueEngineering #DiseaseModeling #DrugDiscovery #Bioengineering #InVitro #RegenerativeMedicine