Jeremy Barr

Jeremy Barr

@jeremyjbarr.bsky.social

Bacteriophage biologist and enthusiast. Associate Professor at the School of Biological Sciences, Monash University.

1.5K followers137 following29 posts

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- Temperate phage biology is HARD. We cant using traditional PFU plating (due to superinfection immunity), most isolates were poly-lysogens, equipment required is expensive and technically limiting, and the methods to study these phage had not been developed.

Im really excited for this work as it sets up a platform for us to study, characterise, and eventually determine what impacts temperate phages may have on the human gut microbiome. Future work may even allow us to manipulate the gut using these unique viruses.

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A couple of highlights from the paper: - We find >100 new bacteriophages, many of which had never been isolated before and we're only 'discovered' through metagenomic sequencing approaches.

- We test ten diverse induction agents, and the most surprising one was that human cellular lysis products were strong inducers of temperate phages, suggestive of a mechanistic link between gastrointestinal cell lysis/inflammation and the gut virome.

This was a really challenging study where we attempted to characterise the biology of hundreds of temperate bacteriophages from the human gut - in the lab! This required anaerobic chambers to grow the gut bacteria, entirely new methods to induce and study the bacteriophages.

This hospital-specific phage cocktail can be replicated across many institutions and pathogens, and we hope it will improve treatment outcomes for patients suffering from these multidrug-resistant bacterial pathogens.

In this work, we developed, for the first time, a phage cocktail personalised to a hospital's multidrug-resistant pathogen profile. This product, which we call Entelli-02, offers a frontline treatment option against Enterobacter infections that are resistant to most antibiotics.

Jeremy Barr reposted

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Jeremy Barr reposted

📣📣Are you looking for a postdoc? 📣📣 Does a EU or Horizon Europe assoc country (eg UK, S Korea) seem like a good destination? These fellowships a great funding option for anyone in the 🌎 👀 Check them out - next call opens 8 May 🧪 👨‍🔬👩‍🔬 marie-sklodowska-curie-actions.ec.europa.eu/actions/post...

marie-sklodowska-curie-actions.ec.europa.euPostdoctoral FellowshipsThe information provided on this page is a summary of the main rules and requirements for Postdoctoral Fellowships (PFs) and who can apply for them.

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Did you know that VoM is heading down under? 🌏🦘 Join us for the Viruses of Microbes (VoM) Conference, set against the stunning backdrop of Cairns, QLD - July 15-19th, 2024 🏝️ Follow us for news & updates! 📅 #VoM2024

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Placing this conclusion more broadly - our field is on the precipice of increased application of phages to human patients in an attempt to combat superbug infections. Our work suggests we should remove our blinders to explore potential symbiotic phage-mammalian interactions.

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Once these phages are internalised, a proportion of them are likely degraded and metabolised by the cell. From a macromolecular stance, phages are condensed packets of nucleotides wrapped in a protein shell. Thus, they may provide an exogenous source of key nutrients.

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Next, we used extensive antibody microarrays from Kinexus, consisting of >1000 antibodies targeting broad cellular pathways Phage treatment to cells induced broad and extensive protein-phosphorylation events leading to increases in cellular metabolism, growth and proliferation

We then confirmed these phenomena using a cell proliferation assay. In vitro mammalian cells treated with phage broadly showed an increase in their proliferation over 72 hours, which correlated with a prolonged G0/G1 cell cycle growth phase.

We first show that the application of purified T4 phage across three mammalian cell lines led to rapid uptake and internalisation, but importantly, did not trigger a pro-inflammatory response. This suggests that cells carefully traffick and process phage particles.

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