Elin Videvall

Elin Videvall

@elinvidevall.bsky.social

My lab studies wildlife microbiomes and diet at Uppsala University, Sweden. SciLifeLab Group Leader. Previously at Brown University & Smithsonian. Molecular Ecology, Evolution, Hologenomics, Conservation Biology. she/her. https://www.videvall.com/

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Excited to announce that I am organizing a symposium on "Microbiomes in Conservation" at #ISME20 in Auckland, New Zealand together with Madeleine van Oppen. Consider submitting an abstract; it will be a fab conference! Deadline Feb 15! isme-microbes.org/isme20-sessi... @isme-microbes.bsky.social

isme-microbes.orgInvisible allies: the role of microbes in biodiversity conservation – ISMEConvened by Madeleine van Oppen, Australia, and Elin Videvall, Sweden

Last week, visiting PhD student Daniel Ramirez (Dani) from the Natural History Museum in Madrid gave a presentation about the work he's been doing here in our lab group. Dani is studying early-life #microbiome development in pied flycatchers. 🐦

Elin Videvall reposted

I've complained on here a few times about synteny plots that are harder to read than they need to be. I decided it was time to actaully do something about it: introducing SynTangle, a tool for untangling whole-genome synteny plots github.com/Hanliconius/... 1/

github.comGitHub - Hanliconius/SynTangle: On synteny plots, intrinsic tangledness is real, layout tangledness is noise. This tool is for removing layout tangledness.On synteny plots, intrinsic tangledness is real, layout tangledness is noise. This tool is for removing layout tangledness. - Hanliconius/SynTangle
Joe Hanly@hanliconius.bsky.social

I hate to do this with real data, but this is a persistent data vis issue in chromosome synteny riparian plots that we Need to get better at. Left, a synteny plot published today. Right, a rearranged version with exactly the same gross arrangement but with reordered chromosomes:

Elin Videvall reposted

In 2002, success rate at the ERC starting grant was 14%. This already felt too low to both panel and applicants, but was constrained by government funding. Well, 5 years later, it is now projected to be 5%. This is not sustainable.

Devang Mehta🌱🧬@mehta-lab.com

Bravo @erc.europa.eu 🙄

Earlier this week, visiting PhD student Emma Little from Oregon State University gave a presentation to our lab group about cladoseqR. It's a new analytic method on how to incorporate the microbial phylogeny in #microbiome analysis. 🧬💻 We had a great discussion!

Last week, I returned from an incredible roadtrip in Queensland, Australia! 🌏🐨🦘 Saw so many unique animals and beautiful nature! It was definitely a trip of a lifetime! What a fantastic country and landscape 😍 Attached a few pics, (blurry because screenshots from videos).

The legendary Margaret McFall-Ngai 👀 gives the final plenary of #ISME20, titled 'Beginning a partnership and keeping it faithful: lessons from the squid-vibrio symbiosis'. 🦑❤️🦠

Our session on #microbiomes in conservation at #ISME20 is officially done! Full morning and afternoon today with a great lineup of speakers! Thanks to all who presented their important research, it was great to see such a broad diversity of topics and hosts! 🙏 #InvisibleAllies🦠

Arturo Casadevall opens up the Human Microbiome session; emphasizing that we need ideas, even wrong ones, because these drive the field forward. #ISME20 Also talked about the "pathogenic potential (PP)" of a microbe, and the interesting fungal-driven dinosaur->mammal transition theory. 🦕🦒

Elin Videvall reposted

Reposting for the #ISME20 crowd - If you (or anyone you know) is looking for a postdoc, please come chat to me in Auckland!

Holly Bik@hollybik.bsky.social

My lab is HIRING - we have an opening for a #postdoc focused on marine invertebrate symbioses & evolution (heavy focus on microbial -Omics and bioinformatics, but lots of fun fieldwork opportunities too!) Full position info here: www.biklab.org/join-the-lab Please help spread the word! #SymbioSky

I've sometimes wondered if there are additional reasons why bacteria thrive inside mammal guts, and this is a fascinating answer to that question. 👀

Kevin Forsberg@kvnforsberg.bsky.social

Humans and bacteria share strategies to defend against viruses. We wondered: could they use each other's genes? Yes, both can! Bacteria can use human immune genes to defend against phages AND Human cells can use bacterial genes for viral defense. www.biorxiv.org/content/10.6...

#ExE2026 So many animal microbiome talks that it has become a standing joke of the conference. 😅 Sorry on behalf of WAME and the workshop. We love these talks though! 😊

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I did an interview on the MVIF podcast with @pamferretti.bsky.social about wild animal microbiomes, for anyone interested! 🦠🧬

Microbiome Virtual International Forum@microbiomevif.bsky.social

#MVIFconversations podcast episode 6 with @elinvidevall.bsky.social is OUT! ▶️ Spotify: open.spotify.com/episode/39MK... ▶️ Amazon music: music.amazon.com/podcasts/81c... ▶️ Apple Music: podcasts.apple.com/us/podcast/e... ▶️ YouTube podcast: youtu.be/_wQ4AxWoPTc 1/2