We’re really excited to announce that our work on improving RNA-seq efficiency is now out in iScience! 🧬 We use a “read-funnel” strategy to identify sources of read loss and develop prime-seq2, increasing usable reads by 60% at the same sequencing cost. doi.org/10.1016/j.isci.2026.116984
Enard/Hellmann Lab
Enard/Hellmann Lab
@enardhellmannwg.bsky.social
Enard/Hellmann Group at LMU Munich, interested in evolution 🦍🦧🐒, primate-derived iPSCs 🧫 , single-cell omics 🧬, and method development of genomic technologies ⚙️ ➡️ https://www.bio.lmu.de/en/research/research-fields/humanbiology/
108 followers122 following35 posts
We’re really excited to announce that CroCoNet, our framework for cross-species network comparisons, is now out in Genome Biology! 🎉 If you work with scRNA-seq data from multiple species and want to make meaning comparisons while accounting for noise, check it out: doi.org/10.1186/s13059-026-04152-5
The accompanying R package is available at: hellmann-lab.github.io/CroCoNet/
Enard/Hellmann Lab reposted
Come and join Nobel laureate Paul Nurse, President @royalsociety.org, and philosopher Christof Rapp @caslmu.bsky.social @lmu.de in exploring one of the most fundamental questions in science: What is Life? Save the date: 17 April, 16:15📍LMU, main building register: info@cas.lmu.de, www.cas.lmu.de
Out now: we’re happy to share our new preprint on CroCoNet (Cross-species Comparison of Networks), a framework for robust comparative network analyses. 👉 doi.org/10.1101/2025...
Want to explore your own data with CroCoNet? Check out the R package and the associated tutorial at hellmann-lab.github.io/CroCoNet/. Huge thanks to all authors and everyone who helped shape CroCoNet!
Out now: we’re happy to share our new preprint on CroCoNet (Cross-species Comparison of Networks), a framework for robust comparative network analyses. 👉 doi.org/10.1101/2025...
Out now: we’re happy to share our new preprint on CroCoNet (Cross-species Comparison of Networks), a framework for robust comparative network analyses. 👉 doi.org/10.1101/2025...
Hellnardos at 13th GSCN conference @gscnoffice.bsky.social. We are excited about the next 3 days of stem cell science! 🧫
We’re excited to host @nkschaefer.bsky.social from the Pollen Lab @brainevodevo.bsky.social, UCSF! He’ll present Cellbouncer, a new bioinformatic tool for pooled single-cell processing that yields insights into hominid evolution 🧬 More about the lab 👉 www.pollenlab.org
Big congratulations to @pascalstuempfl.bsky.social, who successfully defended his Master’s thesis “Gene Network Conservation Metrics – Development and Benchmarking” last Friday! It’s been a pleasure having you in the group, and we’re excited to see what comes next — well done, Pascal! 🎉👏
Enard/Hellmann Lab reposted
I am thrilled to finally share our new preprint on prime-seq2 🚀 We improved one of the most cost-efficient bulk RNAseq protocols out there to end up with +60% usable reads. Check it out: doi.org/10.1101/2025... a🧵1/9
🎉Excited to share our new preprint: “Improving RNA-seq protocols” We introduce a systematic approach to maximize usable reads in RNA-seq. With this, we created prime-seq2, improving one of the most cost-efficient bulk RNAseq protocols. 👉Check it out: doi.org/10.1101/2025...
For those who want to try it in the lab: we also published a step-by-step, easy-to-follow protocol for prime-seq2 🧪 👉 dx.doi.org/10.17504/pro...
Office (2/5): Welcome to the Pee-to-Profile Office! 🧪 Johanna developed a protocol to reprogram iPSCs from primate urine cells, 🧠 Manqi uses them to make neurons to study FOXP2, 🧫 Eva differentiates them to macrophages for cross-species comparisons and 📈 Daniel extends prime-seq to profile them all!
Enard/Hellmann Lab reposted
🎉 50 years of the Faculty of #Biology - and 20 years of interdisciplinary work at the #Biocenter! “Biology today is a big data science,” says Professor Stibor. AI, biodiversity loss & synthetic biology will be key topics of the future.📖 To the interview: www.lmu.de/en/newsroom/...
New paper from the group! 📃 doi.org/10.7554/eLif... We investigated orthologous cell types in primate EBs and found that marker genes don't transfer well across species. Check it out for insights into cross-species scRNA-seq and explore the data in our shiny app: 🔎 shiny.bio.lmu.de/Cross_Specie...
Enard/Hellmann Lab reposted
🚨New preprint from @bonevlab.bsky.social 🚨: What are the key epigenetic mechanisms that drive species-specific gene regulation during primate neurogenesis - and how do they contribute to the evolution of the human neocortex? Here’s what we discovered 👇 www.biorxiv.org/content/10.1...
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