Galaxy Project

Galaxy Project

@galaxyproject.bsky.social

The Galaxy Project powers global life sciences analytics by turning the world’s most advanced cyberinfrastructure into a free, browser-based analysis platform for everyone. https://galaxyproject.org/

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Galaxy Project
@galaxyproject.bsky.social

#GCC2027 is coming to the Montréal area! 🇨🇦 June 26: Training June 27–29: Conference June 30–July 1: CoFest Stay tuned for keynotes and the training lineup! Want to help shape the program? Join the Scientific Committee. galaxyproject.org/events/gcc20...

galaxyproject.org2027 Galaxy Community Conference (GCC2027)The yearly conference of the Galaxy community, where researchers, developers, and educators from around the world meet to share science, learn, and shape the future of open data analysis.
Galaxy Project
@galaxyproject.bsky.social

🚀 The CM4AI–AnVIL Cell Map Prediction DREAM Challenge is officially LIVE! Individuals and teams are invited to develop AI models that predict protein localization in human cells. 🏆 $50K in cash prizes + $70K in cloud credits! Get started: www.synapse.org/Synapse:syn7... #AnVIL #DREAMChallenge

synapse.orgCM4AI-AnVIL DREAM Challenge'CM4AI-AnVIL DREAM Challenge' (Synapse ID: syn77349038) is a project on Synapse. Synapse is a platform for supporting scientific collaborations centered around shared biomedical data sets.
Galaxy Project
@galaxyproject.bsky.social

Save the date for #GCC2027! 🗓️ The Galaxy Community Conference comes to Longueuil in the Montréal area, Québec, Canada, June 26–July 1, 2027. Join Galaxy users, developers, researchers, and educators for research presentations, training, and collaboration. galaxyproject.org/events/gcc20...

galaxyproject.org2027 Galaxy Community Conference (GCC2027)The yearly conference of the Galaxy community, where researchers, developers, and educators from around the world meet to share science, learn, and shape the future of open data analysis.
Galaxy Project
@galaxyproject.bsky.social

🌊 Galaxy Europe is diving into Ocean Hackathon 2026! From October 16–18, teams across 11 cities will turn marine data into innovative solutions, with Galaxy for Earth System Sciences supporting accessible, reproducible analysis. 🌐 galaxyproject.org/news/2026-10... #usegalaxy

galaxyproject.orgGalaxy Europe Goes Ocean: Ready for Ocean Hackathon 2026!48 hours, ocean data and fresh ideas! Galaxy Europe's Earth System Sciences platform joins the Ocean Hackathon adventure.
Galaxy Project
@galaxyproject.bsky.social

📣 Workflow4Experimenters 2027 Analyze your data with Galaxy and the Workflow4Metabolomics infrastructure! During this one-week-long on-site course (preceded by half-a-week of webinars), you will learn how to use the W4M-promoted Galaxy tools for metabolomics, (1/2)

Galaxy Project
@galaxyproject.bsky.social

and analyze your own LC-MS, GC-MS or NMR data through tutoring sessions. 📍 Rennes, France 📅 5 April 2027 🔗 More info & registration: https://training.galaxyproject.org/training-material/events/2027-04-05-workflow4experimenters-2027.html #UseGalaxy #GalaxyProject #EOSC (2/2)

training.galaxyproject.orgWorkflow4Experimenters 2027Analyze your data with Galaxy and the Workflow4Metabolomics infrastructure! During this one-week-long on-site course (preceded by half-a-week of webinars), you will learn how to use the W4M-promoted Galaxy tools for metabolomics, and analyze your own LC-MS, GC-MS or NMR data through tutoring sessions.
Galaxy Project
@galaxyproject.bsky.social

Workshop on high-throughput sequencing data analysis with Galaxy This course introduces scientists to the data analysis platform Galaxy Freiburg im Breisgau, Germany 1 March 2027 Info: https://training.galaxyproject.org/training-material/events/2027-03-01-hts-workshop-freiburg.html

training.galaxyproject.orgWorkshop on high-throughput sequencing data analysis with GalaxyThis course introduces scientists to the data analysis platform Galaxy. The course is designed for beginners; no prior programming skills are required.
Galaxy Project
@galaxyproject.bsky.social

📣 microGalaxy Hackathon for Tool Development Join the microGalaxy community on October 14th to update outdated metagenomics tools in the IUC repository! 📍 Online 📅 14 October 2026 🔗 More info & registration: https://galaxyproject.org/events/2026-10-14-microgalaxy-hackathon/ #UseGalaxy (1/2)

galaxyproject.orgmicroGalaxy Hackathon for Tool DevelopmentJoin the microGalaxy community on October 14th to update outdated metagenomics tools in the IUC repository!
Galaxy Project
@galaxyproject.bsky.social

📄 Long text + LLM context limits? Galaxy can help. The new LangChain Text Splitters tool breaks long texts into manageable chunks for tasks like summarization, translation & RAG, all within Galaxy workflows. 🤖✨ Learn more: galaxyproject.org/news/2026-10... #usegalaxy #LLM #OpenScience

galaxyproject.orgLangChain Text Splitters, the Missing Link when Processing Long Texts with LLMsCircumvent context window limits of LLMs by splitting long texts into manageable chunks
Galaxy Project
@galaxyproject.bsky.social

🧬 New on the GTN: explore how protein structure can influence ligand-binding site predictions using SIMORGH, ColabFold, and structural ensembles. See how deep learning and Galaxy can help account for protein dynamics in binding-site analysis. training.galaxyproject.org/training-mat...

training.galaxyproject.orgStatistics and Machine Learning / Comparing ligand-binding site predictions across different protein structure modalities using SIMORGH / Hands-on: Comparing ligand-binding site predictions across dif...Statistical Analyses for omics data and machine learning using Galaxy tools
Galaxy Project
@galaxyproject.bsky.social

🦠🛠️ Join the **microGalaxy Tool Development Hackathon** on October 14! Help update highly used metagenomics tools in Galaxy’s IUC repository and contribute alongside the microGalaxy community. 🌐 Online + free to participate 🔗 galaxyproject.org/news/2026-09... #usegalaxy #microGalaxy #Metagenomics

galaxyproject.orgmicroGalaxy Hackathon for Tool DevelopmentJoin the microGalaxy community on October 14th to update outdated metagenomics tools in the IUC repository!
Galaxy Project
@galaxyproject.bsky.social

Only a handful of spots remain for the 2nd Galaxy Tool Development Workshop in Freiburg (7-9 October 2026). Registration closes on 11 September, and remote participation is available. https://galaxyproject.org/news/2026-09-09-tool-dev-workshop/ #UseGalaxy #GalaxyProject #EOSC

galaxyproject.orgLast Few Spots left - Galaxy Tool Development Workshop, Registration Closes 14 SeptemberOnly a handful of spots remain for the 2nd Galaxy Tool Development Workshop in Freiburg (7-9 October 2026). Registration closes on 11 September, and remote participation is available.
Galaxy Project
@galaxyproject.bsky.social

The latest Galaxy newsletter is here! 📰✨ Catch up on Galaxy 26.1, Galaxy Labs, UseGalaxy Canada, research and training highlights, community news, jobs, and upcoming events across the Galaxy ecosystem. galaxyproject.org/news/2026-09... #usegalaxy #GalaxyProject

galaxyproject.orgGalaxy Newsletter September 2026Explore Galaxy 26.1 and Galaxy Labs, welcome UseGalaxy Canada, see how Galaxy Australia is simplifying data movement, discover Galaxy-powered wildlife ecology and public-health workflows, and find job...
Galaxy Project
@galaxyproject.bsky.social

🦠 Same species ≠ same strain. A new GTN tutorial shows how SameStr can identify shared microbial strains across metagenomic samples, including donor engraftment after fecal microbiota transplantation. Try it in Galaxy: training.galaxyproject.org/training-mat... #usegalaxy #Microbiome

training.galaxyproject.orgMicrobiome / Detection of shared microbial strains with SameStr / Hands-on: Detection of shared microbial strains with SameStrA microbiome is the community of microorganisms that can usually be found living together in any given habitat. Microbiome research has grown substantially over the past decade in terms of the range o...
Galaxy Project
@galaxyproject.bsky.social

🛠️ Learn to build, test & publish your own Galaxy tools! Join the free, hands-on **Galaxy Tool Development Workshop** in Freiburg, Oct. 7–9. Beginners and experienced Galaxy developers are welcome. galaxyproject.org/events/2026-... #UseGalaxy

galaxyproject.orgThe 2nd Galaxy Tool Development Workshop - Now Open to the wider Community!Join us in Freiburg to learn how to build, test, and publish your own tools for the Galaxy platform - hands-on, beginner-friendly, and led by experienced Galaxy developers
Galaxy Project
@galaxyproject.bsky.social

📚 Galaxy isn’t just for genomics! Explore the GTN’s **Digital Humanities** tutorials covering text mining, cultural data, historical newspapers, audio alignment, and more. training.galaxyproject.org/training-mat... #UseGalaxy #DigitalHumanities

training.galaxyproject.orgDigital Humanities / Tutorial ListContemporary research in the humanities has expanded beyond anything that could be considered traditional. Historians are building interactive digital maps, literary scholars are using computers to l...
Galaxy Project
@galaxyproject.bsky.social

IBSB26: Bioimage Analysis with Galaxy (Workshop+Symposium) Explore bioimage analysis with Galaxy in this hands-on workshop and talk at IBSB26. Leibniz-HKI 16 Sept 2026 Info & reg: https://galaxyproject.org/events/2026-09-17-ibsb2026 #UseGalaxy #EOSC #EuroScienceGateway

galaxyproject.orgIBSB 2026: Bioimage Analysis with Galaxy (Workshop + Symposium Talk)Explore open-source bioimage analysis with Galaxy in this hands-on workshop and conference talk at IBSB 2026.
Galaxy Project
@galaxyproject.bsky.social

Want to explore AI in Galaxy through a real analysis? 🤖🌌 Join Tyler Collins & Ahmed Awan for a free hands-on #Gateways2026 tutorial using metagenomics to explore Galaxy, reproducible workflows, and the capabilities & limits of AI assistance. 📅 Sept. 1 | 1–2:30 PM ucsd.zoom.us/meeting/regi...

ucsd.zoom.usWelcome! You are invited to join a meeting: Gateways 2026 Tutorial: AI-Native Science with Galaxy. After registering, you will receive a confirmation email about joining the meeting.This tutorial introduces participants to the Galaxy Project, an open source platform designed to make computational research more accessible, reproducible, and transparent. After an overview of the pl...

Galaxy Project reposted

ERGA - European Reference Genome Atlas
@ergabiodiv.bsky.social

#ERGAReads | How can we assemble and evaluate thousands of genomes in a fast, accessible and reproducible way? In this publication, #ERGA and @vertebrategenomes.bsky.social recommend @galaxyproject.bsky.social as part of the solution. 👉 www.nature.com/articles/s41... #genomes #assembly

nature.comScalable, accessible and reproducible reference genome assembly and evaluation in Galaxy - Nature BiotechnologyNature Biotechnology - Scalable, accessible and reproducible reference genome assembly and evaluation in Galaxy
Galaxy Project
@galaxyproject.bsky.social

Eight LLMs. One RNA-seq dataset. One question: could AI agents reproduce a published analysis in Galaxy? Six completed the analysis, and all six reproduced the study’s central result. But the failures may be just as interesting as the successes. galaxyproject.org/news/2026-06...

galaxyproject.orgEight LLMs, one RNA-seq dataset: what we learned controlling Galaxy from OrbitWe pointed eight frontier LLMs at the same Candida auris RNA-seq study and asked each to reanalyze it on Galaxy through Orbit. Six reproduced the headline result — and the failures taught us more than...
Galaxy Project
@galaxyproject.bsky.social

The 2026 U.S. cyclosporiasis season is the largest on record. A new BRC Analytics series explores the challenges of Cyclospora genotyping and PyEuk, a new open-source approach now implemented as a Galaxy workflow. 🧬 galaxyproject.org/news/2026-08...

galaxyproject.orgGenotyping Cyclospora: assessing current practicesThe first post in a four-part BRC Analytics series on Cyclospora outbreak analysis: what public genomes, genotyping panels and sequencing data actually exist, and how an independent open implementatio...
Galaxy Project
@galaxyproject.bsky.social

The 2nd Galaxy Tool Development Workshop! Join us to learn how to build and publish your own tools for Galaxy; led by experienced Galaxy devs 📍 Dept of Comp Sci, Uni of Freiburg 📅 2026-10-07 🔗 https://galaxyproject.org/events/2026-10-07-tool-dev-workshop/ #UseGalaxy #EOSC #EuroScienceGateway

galaxyproject.orgThe 2nd Galaxy Tool Development Workshop - Now Open to the wider Community!Join us in Freiburg to learn how to build, test, and publish your own tools for the Galaxy platform - hands-on, beginner-friendly, and led by experienced Galaxy developers
Galaxy Project
@galaxyproject.bsky.social

Galaxy has implemented User Defined Tools, where you can specify a python script (and use anything from Bioconductor) that can run in Galaxy. We're rolling this out to a select set of users. Want in? (2/3)

Galaxy Project
@galaxyproject.bsky.social

After ten years on a Jekyll-on-GitHub setup, galaxyproject.eu is now completely powered by the Galaxy Hub — a fast, metadata-driven home that any Galaxy community can reuse. https://galaxyproject.org/news/2026-08-07-eu-website-on-galaxy-hub/ #UseGalaxy #GalaxyProject #EOSC

galaxyproject.orgThe European Galaxy Project Website Is Now Fully Served by the Galaxy HubAfter ten years on a Jekyll-on-GitHub setup, galaxyproject.eu is now completely powered by the Galaxy Hub — a fast, metadata-driven home that any Galaxy community can reuse.

Galaxy Project reposted

Australian BioCommons
@ausbiocommons.bsky.social

Discover #RNASeq on #GalaxyAustralia 🧬💻 Join Mike Thang (UQ / @ausbiocommons.bsky.social) to perform QC, sequence alignment & differential gene expression analysis, and interpret RNA-seq results #Bioinformatics 📅 16 Sept 2026 (9am AEST) 💻 Free for Australian researchers Apply now👇

biocommons.org.auRNA-seq using Galaxy — Australian BioCommonsA hands-on introduction to the fundamentals of RNA-Seq analysis using the Galaxy platform. More information Apply (UQ Staff and Students) Apply (non-UQ)
Galaxy Project
@galaxyproject.bsky.social

Scientific computing has an environmental footprint, and ESG4Stars is working to reduce it. ESG4Stars is working to make scientific computing more sustainable. The new European collaboration kicks off October 5–9 in Freiburg, Germany. galaxyproject.org/events/2026-...

galaxyproject.orgESG4Stars kick-off meetingOur new EU-funded research infrastructure project to reduce the environmental footprint of scientific computing on platforms like Galaxy will begin in October.