Jan Gebauer
Jan Gebauer
@gebauer.bsky.social
Structural biologist studying interactions in the #ECMatrix at atomic levels #ProteinCrystallography at @UniCologne. Also at https://x.com/jan_gebauer and
124 followers28 following49 posts
Ich teile selten so was, aber diese hier halte ich aber für extrem wichtig für den Erhalt unserer Demokratie - und ich befürchte nicht viele interessiert es ...😬 (🇬🇧 in Germany there is massive attack on transparency by the current goverment...) 👇 #IFG weact.campact.de/petitions/sp...
Sylvie Ricard-Blum started the last workshop for today at #MBE2026 — a fabulous talk on known and maybe-not-yet-known interactions of endostatin, and the wider scope of PPIs in the ECM. Now eagerly waiting for the publication of the teased tool created in collab with @valerioizzi.bsky.social 😉
Workshop #1 at #MBE2026 featured @tranejoan.bsky.social and @collagenyoshi.bsky.social back-to-back: first a wonderful talk on collagen trafficking, then a deep dive into lysine hydroxylation in collagens — asking the important question of how lysyl hydroxylases recognise their specific targets.
@nabalabuic.bsky.social starts the second day at #MBE2026. I already spotted the first protein structure so I am in 😉
Jan Gebauer reposted
What a wonderful first #ECR session hosted by @themeshwork.bsky.social! Join in the vibrant community and the future of #ECMatrix is super bright! #MBE2026
Just arrived at #MBE2026 in time for Fiona Watt's talk. Missed @valerioizzi.bsky.social's intro and the first session though — today literally every part of my transport chain was delayed 🤷 Looking forward to an exciting week of science at beautiful @oulu.fi.
This sounds really interesting! Eager to test it with some structures we have lying around. 👍
Excited to unveil Boltz-2, our new model capable not only of predicting structures but also binding affinities! Boltz-2 is the first AI model to approach the performance of FEP simulations while being more than 1000x faster! All open-sourced under MIT license! A thread… 🤗🚀
Jan Gebauer reposted
Congratulations to this year’s winner of the Young Investigator Award: Kristina Bubb from Cologne! @nystromlab.bsky.social
Jan Gebauer reposted
I added support for Boltz1 so we can calculate ipSAE and other scores for pairwise protein-protein interactions on AF2, AF3, and Boltz1 models. Will add nucleic acids eventually. github.com/DunbrackLab/...
🧵 on our preprint: Zhang & Skolnick's TM score for comparing model of protein to experimental structures of same protein. The d_j are essentially the same as the aligned error in Alphafold. After any structure alignment, it's the displacement of model Calpha from experimental Calpha of residue j.
Get your data out now! 🚀 BMC has a special edition on “The Extracellular Matrix,” and I’m honoured to guest edit. We’re accepting manuscripts on all aspects of ECM, but if you know my background, you’ll know I’m especially excited about structural data and collagens 😉. [1/2]
BMC has a solid JIF and welcomes all scientifically valid studies—so write up your story now and submit! 📩 DM me if you have questions or check out www.biomedcentral.com/collections/... #ExtracellularMatrix #ECM #CellBiology #CallForPapers #StructuralBiology [2/2]
A worrying talk about the (planned) deregulation of synthetic biology by the EU commision (and worldwide) from Margret Engelhard (from BfN ) at the #38C3. I am working with GMOs daily, but IN the lab and I am not a fan of releasing them ... media.ccc.de/v/38c3-let-s...
Just heard a talk about #AquaCloning , sounds more like magical cloning. Mostly, Gibson without ANY enzymes. Has anyone tried it in realilty? How good does it work? #Genetics #MolecularBiology journals.plos.org/plosone/arti...
You are up to date.