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Great ambient music, terrible phylogeny, highly uncertain ancestral state
Nico Mongiardino Koch
@nmkphylo.bsky.social
Asst prof of phylogenetics at Colorado State University. Deep-time evolutionary biology, from genomes to fossils 🇦🇷 https://www.nmkphylo.com/
269 followers397 following64 posts
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Great ambient music, terrible phylogeny, highly uncertain ancestral state
Nico Mongiardino Koch reposted
🚨Cover reveal🚨: My first non-academic book: How to Find a Martian: A Fossil Hunter's Guide to the Red Planet. Published Spring 2027 by @oneworldbooks.bsky.social (UK/Ireland/Commonwealth, this cover) and @uchicagopress.bsky.social (North America, other cover). 100% human-authored!
Nico Mongiardino Koch reposted
My new book, Phylogenetic Biology, is now published. Available online for free at dunnlab.org/phylogenetic... . Physical copies can be purchased at shop.lightningsource.com/b/085?params... or your favorite bookstore.
Nico Mongiardino Koch reposted
Is that Bayesian time of the year in #sistematicaunam @unam when we use the pain of non-convergence @nmkphylo.bsky.social experienced some years ago, that make for a great cautionary tale on parametric #phylogenetics
When I started my PhD ~10 years ago, only 2/5 echinoderm groups (the star-shaped sea stars and brittle stars) had genome-scale phylogenetic datasets. I am proud to say that the quest to complete the clade is now over doi.org/10.1098/rsos...
Becoming a part of the @systbiol.bsky.social community is one of my greatest scientific achievements. I am happy to celebrate this today with a journal cover and a nomination to the editorial team
Nico Mongiardino Koch reposted
Our latest paper, now how to conciliate apparently discrepant evolutionary rate patterns in squamates, but which may well apply to any study system with Stephanie Pierce and @7brumas.bsky.social #macroevolution academic.oup.com/sysbio/advan...
Nico Mongiardino Koch reposted
I am extremely happy to see that our review on fossil tip-dating is out in early view in Systematic Biology! A huge thanks to all the authors of this massive project (@heckeberg.bsky.social, @basantakhakurel.bsky.social, Gustavo Darlim, and @hoehna.bsky.social)! academic.oup.com/sysbio/advan...
Nico Mongiardino Koch reposted
🚨Palaeoverse Lecture Series🚨 🗓️25th September 2025, 15:00 UTC🗓️ Join us next week to hear from @nmkphylo.bsky.social and @russellgarwood.co.uk, on “The Tree of Life and Death: What do Fossil Taxa Contribute to Morphological Phylogenetics?” 🌳🐣⚰️ Register here: bit.ly/palaeoverse-...
Nico Mongiardino Koch reposted
🚨Palaeoverse Lecture Series🚨 It’s time to announce our Summer 2025 talk schedule 👀 Looking forward to hearing from @spissatella.bsky.social, @sauropodlets.bsky.social, @nmkphylo.bsky.social and @russellgarwood.co.uk! Sign up here: bit.ly/palaeoverse-lecture-series-2025
Nico Mongiardino Koch reposted
📢 Tired of choosing between fossils to incorporate into your phylogenetic analysis? Us too. 💥 Check out our new preprint on incorporating stratigraphic ranges into the FBD model, implemented in BEAST2. We explore how using ranges affects the inference of dog 🐶 and penguin 🐧 trees 🌳
Enhancing Evolutionary Timelines: The Impact of Stratigraphic Range Information on Phylogenetic Inference https://www.biorxiv.org/content/10.1101/2025.04.17.649084v1
Nico Mongiardino Koch reposted
Nico Mongiardino Koch reposted
I finally have something worth posting here! A new paper on wormsI never expected to see fossilised! Juracanthocephalus is the first body fossil of Acanthocephala and remarkably provides links with rotifers and other gnathiferans. Published in @nature.com www.nature.com/articles/s41...
Check out my interview with @methodsinecoevol.bsky.social for some thoughts on phylogenies, uncertainty, and the complexities of life as a scientist
Our next author shortlisted for the 2024 Robert May Prize is @nmkphylo.bsky.social 🏆 Head over to the Methods Blog to read about his research and his journal in ecology 🌎 🧪
More good news!! Our (@russellgarwood.co.uk, @cambriannelids.bsky.social) 2023 article in Palaeontology is a #TopCitedArticle! onlinelibrary.wiley.com/doi/full/10....
One of the wood-associated seastars we described last year was chosen as one the top 10 new marine species of 2024! ⭐️
(8/10) The Scripps Cousins Wood-Dwelling Seastar has some remarkable adaptations for life on sunken wood. marinespecies.org/worms-top-te... @scrippsocean.bsky.social #toptenmarinespecies #taxonomistappreciationday #OceanDecade #GenOcean #marinespecies #deepsea
Nico Mongiardino Koch reposted
Like morphometrics, micro-CT scanning, and morphological evolution? Then please consider applying for our 18 month postdoc position at the university of Southampton! Details here: www.jobs.ac.uk/job/DMF402/r...
New preprint out with @echinerd.bsky.social et al. on total-evidence dating showcasing: 1) Sea urchins (the best clade) 2) Lyrics by Peter Gabriel-era Genesis (the best prog band) 3) Extreme effect of the type of relaxed clock on phylogenetic and macroevolutionary inferences (a bit scary honestly)
But the clock, tick-tock: the preeminence of relaxed clock models in total-evidence dated phylogenetics https://www.biorxiv.org/content/10.1101/2025.02.28.640870v1
To celebrate the 7th month of our exile in 🇦🇷 (or 29.17% of our sentence), it sure is good to share with everyone that I have become a remote member of @trsimoes.bsky.social lab at Princeton EEB
I was sent this paper to review about a month ago by the journal MDPI Plants. After reading the abstract I decided not to. I will leave the abstract here without further comments. 1/7
Geometric Models of Speciation in Minimally Monophyletic Genera Using High-Resolution Phylogenetics https://pubmed.ncbi.nlm.nih.gov/40006789/
I was sent this paper to review about a month ago by the journal MDPI Plants. After reading the abstract I decided not to. I will leave the abstract here without further comments. 1/7
Geometric Models of Speciation in Minimally Monophyletic Genera Using High-Resolution Phylogenetics https://pubmed.ncbi.nlm.nih.gov/40006789/
I was sent this paper to review about a month ago by the journal MDPI Plants. After reading the abstract I decided not to. I will leave the abstract here without further comments. 1/7
Geometric Models of Speciation in Minimally Monophyletic Genera Using High-Resolution Phylogenetics https://pubmed.ncbi.nlm.nih.gov/40006789/
Altmetric has gone rogue with a rant about atonal music and metal. @russellgarwood.co.uk I bet you didn’t see that coming
THREAD BORN IN DISSONANCE An ophidian trek into the heart of how paradigm shifts can happen in modern music. www.youtube.com/watch?v=xtO3... 1/45
Nico Mongiardino Koch reposted
New paper in Systematic Biology with cool dude @jgsaulsbury.bsky.social academic.oup.com/sysbio/advan...
Nico Mongiardino Koch reposted
Job Alert: Senior Research Associate in Phylogenomics @bristolpalaeo.bsky.social researching timing, sequence and phenotypic consequences of rediploidisation following whole genome duplication - comparative genomics, molecular clock and phenotypic disparity methods, with @jameswclark.bsky.social
Nico Mongiardino Koch reposted
If you like snowflakes, check our new preprint about axial patterning in brittle stars ⭐ We looked at the expression of anteroposterior patterning genes in Amphipholis squamata juveniles, and compared it with existing data from other classes www.biorxiv.org/content/10.1... @lowelab.bsky.social
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