Andy Hickl
Andy Hickl
@andyhickl.bsky.social
CTO, AllenInstitute.org. Advisor, Fathom.org. He/him. Working at intersection of AI and biology.
945 followers1.6K following1.8K posts
Andy Hickl reposted
We’re #hiring a Director for Studio D3, our center for data-driven discovery at the @alleninstitute.bsky.social. 🧪 www.linkedin.com/jobs/view/41...
We’re #hiring a Director for Studio D3, our center for data-driven discovery at the @alleninstitute.bsky.social. 🧪 www.linkedin.com/jobs/view/41...
Mental health treatments should be guided by science, not misinformation. With 13% of American adults relying on SSRIs to manage depression and anxiety, the new HHS Secretary’s unscientific claims about these medications are cause for outrage 🧪 www.motherjones.com/politics/202...
Mental health treatments should be guided by science, not misinformation. With 13% of American adults relying on SSRIs to manage depression and anxiety, the new HHS Secretary’s unscientific claims about these medications are cause for outrage 🧪 www.motherjones.com/politics/202...
Seeing a lot of hype about AI models trained for “under $50.” Let’s be real—these models are distilled from much larger models trained with massive resources. Distillation is useful, but calling it “cheap training” seems misleading. What am I missing? www.theverge.com/news/607341/...
Aptly put: Tom Frieden, a former CDC director, compared the halting of outbreak updates to “finding out that your local fire department has been told not to sound any fire alarms”. www.ft.com/content/6067...
When the Trump administration took a key climate justice tool offline, a coalition of data scientist heroes restored it within 48 hours. 🧪 www.ehn.org/scientists-r...
What AI should exist — but doesn’t yet — to transform biology? The Paul G. Allen Frontiers Group has launched the Ask Anything, Change Everything campaign to gather bold ideas on how AI can revolutionize our understanding of fundamental biology. alleninstitute.org/ask-anything...
Aviary from FutureHouse provides a new framework for training language agents on real-world scientific challenges, including protein stability, DNA engineering, and literature-based question answering. 🧪 arxiv.org/pdf/2412.21154
Andy Hickl reposted
Andy Hickl reposted
The Allen Institute and the University of Washington have released a new AI search tool to answer scientific queries of OpenAccess content Preprint released in @arxiv-cs-cl.bsky.social OpenScholar: Synthesizing Scientific Literature with Retrieval-augmented LMs arxiv.org/abs/2411.14199
Andy Hickl reposted
Meet ACE - a new tool for comparing annotations across Allen Institute transcriptomic taxonomies! Join us for a webinar on how to use it in your #neuroscience research, incl. studies using our Alzheimer's datasets. 📆 Dec. 18, 9:30am PT 💻 Webinar 🎟️ alleninstitute.org/events/cell_... #neuroskyence
Andy Hickl reposted
alleninstitute.org/careers/inte... Internships and Postbac opportunities open at the Allen Institute, applications close January 7th 2025. Great opportunity for anyone interested in life sciences research or science-support careers. Spread the word!
Cool Yule read: this article highlights how behavioral diversity in artificial intelligence “teams” can significantly enhance problem-solving & adaptability, something that could change how we approach challenges in (AI) research. 🧪 arxiv.org/abs/2412.16244
Whoa: 9 sea snake species have regained the genetic requirements for advanced color vision, showing that complex traits lost to evolution can be regained. phys.org/news/2024-12...
I’m so stealing this idea. Such a cool way to ensure #deib is built into a team’s mindset. Thanks for sharing, @sarahstern.bsky.social
At (most) lab meetings we have a “moment for diversity” where that week’s presenter either tells us about their culture or presents some topic related to diversity and inclusion. This week I chose to spend a few minutes talking about Rita Levi-Montalcini. en.m.wikipedia.org/wiki/Rita_Le...
The Washington Post nails it: AI is transforming healthcare, from diagnostics to personalized treatments. 2025 will be the year of AI in life sciences—thoughtful integration is critical. 🧪 Read more: www.washingtonpost.com/opinions/202...
🧪Abhishaike Mahajan examines Recursion’s shift from cell painting to brightfield microscopy. The piece highlights how #ml has unlocked brightfield imaging as a label-free alternative, addressing challenges of cell painting. A must-read: www.owlposting.com/p/why-recurs...
Today, healthcare (a sorta ok proxy for life sciences) generates about 30% of the world’s data volume. By 2025, its data growth rate will reach 36%, faster than manufacturing, financial services, and media & entertainment. www.rbccm.com/en/gib/healt...
If you estimate the amount of data available in 2025 as 175 ZB, healthcare is responsible for 52.5 billion TB of data. That’s a lot. www.statista.com/statistics/9...
Predicting the results of experiments is challenging, especially in fields like neuroscience. This recent study shows that fine-tuned LLMs, like BrainGPT, can predict neuroscience results more accurately than human experts on benchmarks. 🧪 https://www.nature.com/articles/s41562-024-02046-9.pdf
@jshendure.bsky.social and team continually blow me away
What if we could read the diary of a cell? Researchers from around the world, including #SeaSynBio's @jshendure.bsky.social, share with @nytimes.com' @carlzimmer.bsky.social their vision for how an emerging suite of technologies could change how we study life. 🔗 www.nytimes.com/2024/11/25/s...
This is a great fellowship for any postdoc who wants to work with #neuro data in a nurturing environment at @alleninstitute.bsky.social. Deadline is approaching!
My team at @alleninstitute.bsky.social is fortunate to be sponsored by the Shanahan Foundation to offer fellowships in data-driven #neuroscience. Apply by December 16! #postdocs #mlsky https://alleninstitute.org/careers/internships-and-postbac/shanahan-foundation-fellowship/
This is the best take on the potential of predictive biology I’ve come across 🧪 open.substack.com/pub/creode/p...
Andy Hickl reposted
Tom suggests replacing the logic of prereg -> confirmation with the logic of train/validation/test splits. The place this approach is really, really needed is in historical data — where we can never get another equivalent sample! Our ordinary understanding of replication is broken there.
Example: you split the data into 2 sets. You run several analyses in one part. You grok it many ways. You do subdivide that into folds to find analyses that minimize error in folds when slopes are estimated from others. When you have an analysis you like, you independently confirm in the other set
I like this article, despite its clickbaity title — largely because there’s stuff for us to do as regular scientists 🧪 www.nature.com/articles/d41...
Framing AI as a threat to human agency oversimplifies its role and potential. We need to focus on how AI can complement human decision-making — especially in fields like life sciences, where it’s accelerating discoveries 🧪 www.journals.uchicago.edu/doi/10.1086/...