Ben Pedigo

Ben Pedigo

@bdpedigo.bsky.social

Connectomics, neuroscience, data science, open science | Scientist @AllenInstitute | Formerly @ JHU BME, UW, MSFTResearch | 🚲 🐦 🏔

113 followers220 following7 posts

Ben Pedigo reposted

Ben Pedigo reposted

Very happy our work on a weird new nanoscale morphological feature is out in @science.org. A massive effort involving different high resolution microscopy techniques, multiple institutes, & years of work to convince ourselves DENDRITIC NARROWINGS EXIST #neuroskyence 🧪 doi.org/10.1126/scia...

buff.lyDendritic shaft constrictions shape synaptic integration in neuronsFor nearly 150 years, textbooks have described dendritic morphology as optimized for efficient synaptic voltage transfer from spines to the soma, implemented as a tubular design respecting Rall’s 3/2…

Ben Pedigo reposted

We have a new #1 Link 🚊 ridership day! On Friday, June 19, Link light rail saw about 280,000 riders, amid the USA 🇺🇸 v Australia 🇦🇺 World Cup ⚽️ match and Mariners ⚾️ home game day. 2️⃣8️⃣0️⃣0️⃣0️⃣0️⃣

Ben Pedigo reposted

Replying to @qagggy.bsky.social

ORDINANCE PASSES UNANIMOUSLY SHARED STREETS ARE LEGAL IN THE CITY OF SEATTLE THIS HAS BEEN MY DREAM FOR YEARS AND NOW IT IS HAPPENING IF YOU COME HOME FROM EUROPE WISHING WE COULD HAVE WHAT THEY HAVE THEN WHY NOT DO SOMETHING ABOUT IT SOMETIMES YOU WILL SUCCEED

Ben Pedigo reposted

Great turnout for Bring Your Own Chair at Pike Place today 🪑 Thanks to everyone who showed up, grabbed lunch, and helped demonstrate what a more people-first Pike Place can look like. More space for people. More reasons to stay. Let’s keep it going.

Seattle Streets Alliance@streetsalliance.bsky.social

Pike Place pilot: foot traffic +5.6%, sales +6.5%. People-first streets work. 🪑 Bring Your Own Chair 🗓️ Wed, 4/29 🕛 12:00 PM – 1:00 PM 📍 East side of Pike Place Grab lunch, take a seat, show demand for year-round seating. More info about BYOC @ Pike Place: www.streetsalliance.org/get-involved...

Ben Pedigo reposted

When a fly lands on your arm, how does your nervous system decide where to swat? By reconstructing tactile axons in a Drosophila connectome, we found a leg somatotopic map and downstream circuits that sample the map to initiate targeted grooming Led by Leila Elabbady, PhD doi.org/10.64898/202...

Ben Pedigo reposted

From @bdpedigo.bsky.social: a super efficient, highly reliable, and very generalizable method for mesh structure classification, applied here to spine detection across basically every synapse onto a cell in the MICRoNS dataset.

bioRxiv Neuroscience@biorxiv-neursci.bsky.social

A quantitative census of millions of postsynaptic structures in a large electron microscopy volume of mouse visual cortex https://www.biorxiv.org/content/10.64898/2026.02.19.706834v1

Ben Pedigo reposted

I will be co-teaching a summer course at Allen Institute on connectomics education please apply. Travel support, new connectomics data sets and learning directly from the scientists who built these datasets. Details here: alleninstitute.org/events/incor...

alleninstitute.orgIncorporating open connectomics data into teaching neuroscienceLearn to analyze open neuroscience data and introduce dry lab modules into your existing classes at the Incorporating Open Connectomics data into...

Ben Pedigo reposted

TODAY at #SfN25 - join us for a nanosymposium exploring insights from the from the Machine Intelligence From Cortical Networks (MICrONS) Project. 📅 Saturday, November 15 🕐 1:00–2:45pm 📍 SDCC Room 30

Ben Pedigo reposted

Don't miss our first talks at #SfN25! Join us at #SfN25 for a nanosymposium exploring insights from the from the Machine Intelligence From Cortical Networks (MICrONS) Project. 📅 Saturday, November 15 🕐 1:00–2:45pm 📍 SDCC Room 30

Great to see the MICrONS data out, congratulations to the huge team who created this amazing data! If you have a scientific question about the data, there are resources available (including annotation and proofreading work) to help you! Submit a request to VORTEX: www.microns-explorer.org/vortex

microns-explorer.orgVirtual Observatory of the Cortex - U24 — MICrONS Explorer
allen institute@alleninstitute.org

How does the brain work? Scientists are closer to the answer with the largest wiring diagram and functional map of a mammalian brain to date. 🧵 🧠📈

Ben Pedigo reposted

Mayor Harrell today on Pike Place: "I have a vision for our connected waterfront and Pike Place Market as one of the greatest pedestrian experiences in the country – where market patrons, visitors from out of town, and downtown residents do not have to worry about vehicle traffic." 1/2

Ben Pedigo reposted

Deadline to apply for the Summer Workshop on the Dynamic Brain is Feb. 1! The 2025 Summer Workshop on the Dynamic Brain is an intensive, project-based residential course for graduate and postdoc researchers interested in developing their computation skills. alleninstitute.org/events/summe... 🧠📈

alleninstitute.orgSummer Workshop on the Dynamic Brain 2025The Summer Workshop on the Dynamic Brain is an intensive, project-based residential course with a focus on the neurobiology of sensory processing, coding, and neural population dynamics.

Last day to apply!

Ben Pedigo@bdpedigo.bsky.social

alleninstitute.org/careers/inte... Internships and Postbac opportunities open at the Allen Institute, applications close January 7th 2025. Great opportunity for anyone interested in life sciences research or science-support careers. Spread the word!

alleninstitute.org/careers/inte... Internships and Postbac opportunities open at the Allen Institute, applications close January 7th 2025. Great opportunity for anyone interested in life sciences research or science-support careers. Spread the word!

alleninstitute.orgInternship & Postbaccalaureate ProgramsStudents and early-career professionals in lab research, biology, neuroscience, immunology, and others should apply for our internships and fellowships.

Ben Pedigo reposted

By popular demand @sngreenways.bsky.social is on BlueSky! Follow for the latest on making Seattle a great place to walk, bike, roll, and live.

Seattle Streets Alliance@streetsalliance.bsky.social

Seattle Prop 1 has passed with a landslide 67% YES vote! This historic levy renewal means safer streets, more sidewalks, better bike lanes, and improved transit access for all. Together, we're shaping a more connected Seattle. Read more on our blog: seattlegreenways.org/get-involved...

Ben Pedigo reposted

This is a map of Seattle's streetcar network in 1941. Same hills.

Ryan Packer@typewriteralley.bsky.social

Kettle says that Seattle is hilly, and not some "standard city in Florida" as a reason not to build a streetcar? He also says that the reason we don't have bus service on First Avenue is because of the unbuilt streetcar (this is false).

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