Francis Windram
Francis Windram
@franwin.co.uk
Postdoc, Computational ecologist interested in spiderwebs, biological traits, imaging, vector-borne disease and good solid R code. www.franwin.co.uk for more details. he/him. Views my own.
80 followers104 following111 posts
Francis Windram reposted
Replying to @adw.bsky.social
There seems to be evidence, at least from lucid dreams, that the experience is in real time because communication is possible with dreamers (I find this mindblowing). Some report that they hear the signals as coming from objects in the dream (a radio, say). www.sciencedirect.com/science/arti...
Francis Windram reposted
NEW: "Ecological and socioeconomic factors associated with globally reported tick-borne viruses", led by @samsambado.bsky.social, in which she applied BRT modelling to a global database of TBVs to pick apart the complicated pathway from transmission to reported cases! www.nature.com/articles/s43...
Francis Windram reposted
Finally managed to get a new version of rTPC (v1.1.0) onto CRAN, with @franwin.co.uk driving most of the changes. There are now 49 models included. cran.r-project.org/web/packages... And parallel fitting of TPCs can be done using mirai and purrr. padpadpadpad.github.io/rTPC/article... 🧪 #rstats
Francis Windram reposted
Francis Windram reposted
Will you be at AMCA 26? Come find @vectorbyte.bsky.social and chat to us about our databases, workshops, data management, and let @samrund.bsky.social give you stickers, perhaps? #AMCA26
ohvbd 1.0.0 has now been released on CRAN! This package should help those looking for VBD data by interfacing with vbdhub.org for searching, and the VectorByte trait and population dynamics databases for data download (alongside much more). vbdhub.org/blog/ohvbd-c... #rstats #vectorbyte #vbd
Francis Windram reposted
I made a filterlist for uBlock Origin to remove Generative AI features on websites. Includes blocks for * Google AI Summaries * YouTube Ask button & chat summaries * GitHub Copilot * Facebook AI chat * X's Grok buttons * Deviantart DreamUp * Booru AI images * And more github.com/Stevoisiak/S...
Francis Windram reposted
{ggview} can print plots to Viewer (Rstudio or Positron) with true scaling. Adjust plot settings and see the final proportions immediately. Save the plot once 👌 e.g.: ggplot(...) + ggview::canvas(width = 220, height = 220*2/3, units = "mm", dpi = 300) per @nrennie.bsky.social #datavis #rstats
Now my favorite part of writing any paper: repeatedly recompiling ggplot graphs to get the text size right #rstats
Francis Windram reposted
@franwin.co.uk drove a massive rework of rTPC this year, making package maintenance much easier. rTPC now supports 49 different model formulations, vignettes are updated, & you can parallelise model fitting using new purrr & mirai, which is DOPE. #rstats 🧪 padpadpadpad.github.io/rTPC/article...
Francis Windram reposted
🚨 New paper 🚨 How does livestock grazing impact tick-borne disease hazard? Our new study in the New Forest National Park used a paired experiment to find out. Important for #rewilding and #conservation grazing schemes! #Ticks #LymeDisease @ukhsa.bsky.social www.sciencedirect.com/science/arti...
This would very quickly become my favourite game I reckon. As a bonus it should very occasionally throw in a problem that seems easy and actually was a fiendish open question in computer science or mathematics for 50+ years.
Share your coding dreams! I used to have nightmares where I was in the center of a dark, scary forest, and I had to code to escape, each coding success taking me closer to the edge and freedom. If I had an error, I'd appear back at the center and have to start over. I never got out. #rstats #databs
I feel genuinely ashamed that this wooooshed me for a full two minutes before I realised they weren't serious. I need more coffee before reading exceptionally funny posts :)
Introducing my new #rstats package {kitchensink} Not sure what the right model to fit is? Should you allow random intercepts, slopes, both? What do Bayesian methods say? Just call {kitchensink::throw} to fit every possible model and see how your results differ!
Additionally, graduate visas only commenced in their current form in January 2021, so this graph could be considered misleading as this point is not highlighted. Also when a government introduces a visa, it is expected that said visa will be used? You can't then use that as an argument against them.
Francis Windram reposted
Emile Michels' first PhD paper published today. Amplification of Borrelia in ticks at pheasant-release sites – an intriguing example how non-native species can increase zoonotic disease risk through spillback. @uniexecec.bsky.social onlinelibrary.wiley.com/doi/10.1111/...
Francis Windram reposted
"Mean daily temperatures predict the thermal limits of malaria transmission better than hourly rate summation" new paper now out in NatComm, led by @martashocket.bsky.social doi.org/10.1038/s414...
New paper out! A common computational approach to predict organismal fitness and distributions in the field could vastly overpredict the potential range of thermal suitability for malaria transmission relative to performance characterized at constant temperatures: www.nature.com/articles/s41...
Francis Windram reposted
New paper out! A common computational approach to predict organismal fitness and distributions in the field could vastly overpredict the potential range of thermal suitability for malaria transmission relative to performance characterized at constant temperatures: www.nature.com/articles/s41...
Francis Windram reposted
Francis Windram reposted
Francis Windram reposted
I’ve long used FiveThirtyEight’s interactive “Hack Your Way To Scientific Glory” to illustrate the idea of p-hacking when I teach statistics. But ABC/Disney killed the site earlier this month :( So I made my own with #rstats and Observable and #QuartoPub ! stats.andrewheiss.com/hack-your-way/