Miguel 💻🧬

this why I believe abstinence is the only real way, but I know it's hard we have been here before with smoking, where the best thing is never to start & the second best is to stop as soon as you can — and it doesn't matter if one cig a day is "not that bad" if you can go down to one go down to nil

cooking

logging on

This is very well-written and made me very sad: kirwinhampshire.substack.com/p/the-dark-n...

Major wildfires continue in parts of Europe🔥 Satellite imagery shows widespread smoke across Portugal, Spain and near to Bordeaux. There's little prospect of any rain relief and the heat will even intensify for some, with temperatures of over 40°C possible in places📈

This puzzle is in my first book (the one no one reads), and I know Claude ate my books (bc I got part of that copyright settlement against Anthropic), so here's Claude's answer, from my book. The whole chapter is about this puzzle basically, builds answer using covariance genetics.

#BCBToolsSeminars Join the next session on June 3 at 11h with Miguel Alvarez Herrera (I2SYSBIO-CSIC) & David San León (CNB-CSIC), presenting VIPERA & MIPERA and FLYCOP. Live streaming available! 👉 goo.su/2WCzwt @i2sysbio.es @cnb-csic.bsky.social Don´t miss it!

Haiku fortuito nº 544 Todo el mundo a pedir su prórroga de alquileres

acabo de migrar mis datos a un PDS europeo! hola desde @eurosky.social :)

I made it my life mission to reference this as many times as I can

Our preprint on the first reconstruction of the core metabolic network of Xylella fastidiosa is now available! Using this model, we were able to design defined minimal media and guide our hypotheses about how this bacterium assimilates acetate and produces polyamines, with in vitro validation 🧪👀👇

🧵El planeta Dune, también conocido como Arrakis no solo ha fascinado a los lectores de Frank Herbet, también a los científicos, que han tratado de simular el clima de este mundo cubierto de arena. En este artículo nuestro compañero David Quintero os cuenta más sobre Dune aemetblog.es/2026/03/30/c...

Our institute #I2SysBio ( @csic.es / @uv.es ) celebrates its 10th anniversary! 🎉🍾 Ten years of advancing #systemsbiology, fostering collaboration, and pushing the boundaries of research to better understand life's complexity #science www.i2sysbio.es/communicatio...

Happy Bioinformatics Day!🧬💻Celebrate the power of data for understanding life at every level. In @pathogenomics.bsky.social we combine experiments with bioinformatics to understand bacterial evolution, virulence, and infection dynamics. #SoyBioinformatica @paururo.bsky.social @ahmig.es @i2sysbio.es

Sharing my entry for @i2sysbio.es's BioVision 2026! "MTB 20:02" is a night photograph of the metabolic network of M. tuberculosis hovering near our building at night (made in Blender, based on iEK1011) methods 🤓👉 tangled.org/ahmig.es/biovision2026 #b3d

"you need to learn how to use gAI or you'll get left behind!" counterpoint! the absolute fastest way to render yourself unemployable is to build your skillset around a tool that does your thinking for you, that everyone has access to, and that one company can change or take away at any time

🥈🥈🥈🗣️🗣️‼️

🎖️ El #I2SysBio ha sido reconocido como el segundo instituto más sostenible del @csic.es 🟢Este logro es fruto del trabajo constante de nuestra Comisión de Sostenibilidad, impulsando iniciativas ambientales, sociales y económicas.

Euphoric for my institute @i2sysbio.es receiving the 2nd @csic.es Sustainability Prize. Proud of the tireless & impactful work of our Committee. Especially happy to share recognition with friends from IDAEA & @geo3bcn-csic.bsky.social. Congrats @icmabcsic.bsky.social and @ibmb-csic.bsky.social

2️⃣ Desde el @i2sysbio.es  presentan sus medidas y, entre ellas, su trabajo para obtener las certificaciones internacionales de investigación sostenible

Happy birthday to one of my favourite haters, Charles Darwin

VIPERA v1.3.0 is out!! 🐍🐍🐍 under the hood: visualization decoupled from computation, faster allele freq distance calculations using a custom tool (afwdist) and improved performance on the user side: same inputs and outputs, a few options removed or renamed, clearer docs and a prettier report 🧪👇

VIPERA v1.2.2 is out!! 🐍 now you can swap in different stats (useful for non-linear allele freq trends). also: new Docker images on release, containerized CI, updated envs, and minor bug fixes for smoother, reproducible intra-patient SARS-CoV-2 analyses 🧪👉 github.com/PathoGenOmics-Lab/VIPERA

FACT THREAD on New Interstellar Object #A11pl3Z This story unfolded pretty fast yesterday for a few reasons. The object was discovered on July 1st UTC by the Asteroid Terrestrial-impact Last Alert System, or ATLAS team. A #NASA funded survey at the University of Hawaii. atlas.fallingstar.com 🔭🧪

So uh, there's a new interstellar object discovered at Chile yesterday. Name is A11pl3Z, has a hyperbolic trajectory of eccentricity 14±4 (WTF). Currently appmag 18, 4 AU away from Earth, and coming to 2 AU perihelion this October. (tagging🔭☄️) Observing it with remote scope rn, calling astronomers..

On June 20, #I2SysBio (@csic.es - @uv.es) hosted Alva Saa from association PRISMA, who shared ten key measures to foster #LGTBIQA+ 🏳️‍🌈 inclusion in #science. The talk addressed actions like staff training, safe reporting channels, and collective visibility in research. 🌐 i2sysbio.es/communicatio...

VIPERA v1.2.1 is here!! 🐍🐍🐍 Our workflow for SARS-CoV-2 intra-patient evolution analysis now fully supports Snakemake 8/9 (with dedicated CI tests), BIONJ trees, richer reports, added config parameters, modular Snakefiles and more! 🧪👉 github.com/PathoGenOmics-Lab/VIPERA

Just back from MCEB 2025 in Granada! I presented our year-long work expanding VIPERA🐍 to help us better track pathogen evolution, here at @pathogenomics.bsky.social - @i2sysbio.bsky.social. I learned so much and returned full of ideas! Thanks to @bcbhubcsic.bsky.social for funding my attendance! 🧪

Un equipo liderado por el @i2sysbio.bsky.social publica una investigación que halla errores en las secuencias genéticas del #coronavirus incluidas en la mayor base de datos mundial. También participan @ibv-csic.bsky.social y el IIS La Fe. delegacion.comunitatvalenciana.csic.es/hallan-error...

By mining GISAID, researchers from I2SysBio uncover sequencing artifacts in SARS-CoV-2. Many repair mutations in the spike protein were due to errors in data processing. #covid19 #viruses #microsky🧪🦠💻🧬 More info: www.i2sysbio.es/communicatio... ⬇️

Oferta de beca de investigación en nuestro instituto con la excelente supervisora Mireia Coscollá @pathogenomics.bsky.social . Proyecto enfocado en bioinformática, tema patógenos 🧪🦠🧫🧬🖥👩‍🔬

Our institute hosts the exhibition “Train the feminist gaze”, promoted by the City Council of Valencia @ajuntament-vlc.bsky.social to highlight the inequalities between women and men present in everyday life and in areas such as art or science 🧪 www.i2sysbio.es/communicatio... #WomenInSTEM 👩‍🔬

Roughly 6,000 readers answered our poll, with many declaring that Bluesky was nicer, kinder and less antagonistic to science than X https://go.nature.com/42tH8Ai

Our research institute I2SysBio🇪🇸 has created a starter pack for researchers in systems biology, everybody is welcome, write us if you want to be added 🔬🧫🧬🖥🦑🦠🌱🦟🪳🪸🌾

Had a great time sharing an exciting new direction for VIPERA🐍 at the I congress of the Spanish Society of Bioinformatics and Computational Biology (SEBiBC)! Can't wait for the next one 🗣️🗣️