Anna Poetsch reposted
Anna Poetsch
Anna Poetsch
@apoetsch.bsky.social
Computational Biologist at Uni Köln. Interested in how genomes encode their own stability.
2.3K followers309 following108 posts
Anna Poetsch reposted
Anna Poetsch reposted
🚀 Applications now open for the CECAD Postdoc Academy for Aging Trajectories! We are thrilled to share the first call for applications for our new CECAD Postdoc Academy for Aging Trajectories. www.cecad.uni-koeln.de/career/postd...
Anna Poetsch reposted
Apply now! This is a great opportunity for truly interdisciplinary research.
🚀 Applications now open for the CECAD Postdoc Academy for Aging Trajectories! We are thrilled to share the first call for applications for our new CECAD Postdoc Academy for Aging Trajectories. Find all information here: uni.koeln/GJPU8
Anna Poetsch reposted
Check out the STAR publication: "Click-code-seq protocol for genome-wide single-nucleotide-resolution mapping of major types of DNA modifications" ⭐ www.cell.com/star-protoco... 🧬 Whole #genome instability 💻 #Computational pipeline
Anna Poetsch reposted
🚨 Publication Alert 🚨 New study from #CRC1678 members @beyerlab.bsky.social and @muellerrom.bsky.social maps kidney and liver disease using cell‑type‑specific damage scores. PDS/HDS track cell injury and reveal circadian disruption and a MASLD/NASH threshold. 🍾🥳 👉 www.cell.com/cell-genomic...
Anna Poetsch reposted
We are happy to present a new paper on gene regulation on the way to regenerating the spinal cord www.biorxiv.org/content/10.6... 🧵 1/4
Thank you to everyone involved in this great collaboration with the @beckergroup.bsky.social. Congratulations to Dima and Ilyas, the first authors of this massive wet-dry endeavor. Also thank you to @dfg.de, the @dcgenomecenter.bsky.social, and @cmcb-tud.bsky.social! 🧵 4/4
We are happy to present a new paper on gene regulation on the way to regenerating the spinal cord www.biorxiv.org/content/10.6... 🧵 1/4
We are happy to present a new paper on the sequence dependence of 🧬 replication timing in the cell cycle. www.biorxiv.org/content/10.6... 🧵 1/6
We are happy to present a new paper on the sequence dependence of 🧬 replication timing in the cell cycle. www.biorxiv.org/content/10.6... 🧵 1/6
For this we use our 🧬-language model, GROVER www.nature.com/articles/s42..., and classical machine learning with feature contribution analysis. 🧵 3/6
We are happy to present a new paper on the sequence dependence of 🧬 replication timing in the cell cycle. www.biorxiv.org/content/10.6... 🧵 1/6
We are looking for a Data and IT manager. You would set up the group’s data infrastructure, data flows, and overall organization on HPC. We aim to understand genomes 🧬 and ageing 👵 with Big Data and Machine / Deep Learning. Interested? Please apply through jobportal.uni-koeln.de/ausschreibun...
Anna Poetsch reposted
🎉Zwei Sonderforschungsbereiche an der Universität zu Köln werden verlängert 🌱🧬Der Sonderforschungsbereich (SFB) 1530 „Aufklärung und Targeting pathogener Mechanismen bei B-Zell-Neoplasien“ und der SFB/TRR 341 „Ökologische Genetik der Pflanzen“ gehen in die zweite Förderperiode ▶️ uni.koeln/J5KLR
A bit more than a week to apply 🧬💻 Also stay tuned for more adds, there will be one for a single cell multiomics postdoc 🧫and one for a Data & IT manager 📈
Are you looking for a new challenge? We are looking for a Deep Learning Engineer. With this role you would set up deep learning infrastructures with the goal to understand genomes 🧬 and ageing 👵 .
Our field has lost a giant. I will never forget his talk I heard as a master student in Tokyo. It was very inspiring for someone so young. However, I am not sure how much the rest of the audience benefited - the French accent was superb, too 🇫🇷 Anyway, I asked the only question 🤭
#RIP Pierre Chambon (1931-2026) 1963 PARP 1970 RNA Pol II 1975 Nucleosome 1977 Split genes 1980 Promoter 1983 enhancer 1986 Nuclear receptor
Anna Poetsch reposted
SLX4IP acts as a genome-wide brake on BLM helicase activity to preserve replication fork stability under stress – both globally and at ALT telomeres Stephanie Panier @spanier55.bsky.social, Kavi Mehta @k4v1.bsky.social and coworkers link.springer.com/article/10.1...
Anna Poetsch reposted
Connecting fragmented aging research through the European Federation for Aging Research | Nature Aging. Read here how EFAR will provide a new platform for the geroscience community Morten Scheibye-Knudsen , Lene Rasmussen, Folkert Kuipers www.nature.com/articles/s43...
I love this initiative. I think generally it would be great to have a grant system for providing basic income, if private citizens propose something that enriches society. This could be art, literature, building up something. It may even make sense for doing science or humanities.
Ireland decided to grant 2000 artists a guaranteed income and found that for every euro invested, the return to the economy was 1.39 euros. They are working on making it permanent: www.theguardian.com/commentisfre... #AcademicSky #universal #news
Anna Poetsch reposted
Lieber @bundestag.de , für viele ist der #ÖPNV essenzielle Infrastruktur. Warum darf der überhaupt bestreikt werden?
Anna Poetsch reposted
🧬🧬🧬 REGISTRATION JUST OPENED! Make sure you join our DNA REPAIR MEETING 2026 ON PHYSIOLOGICAL CAUSES AND CONSEQUENCES OF GENOME INSTABILITY in Cologne, September 7-9, organized by the German Society for DNA Repair (DGDR) and the @dfg.de Research Unit 5504. www.for-5504.com/en/197/Confe...
Anna Poetsch reposted
Are you interested in @ceplas.bsky.social single cell data and spatial transcriptomic data analysis and inference? Then apply for this PhD position in our graduate school HDS-LEE in my group co-supervised by Prof Assent. www.fz-juelich.de/en/careers/j.... For questions don't hesitate to contact me.
Are you interested to hear about DNA Language Models (in German)? Then I would have apodcadt for you. It was a really nice conversation and I hope you’ll like it! www.ghga.de/de/codedesle...
Anna Poetsch reposted
Come to Germany and do a PhD with DKFZ. You'll be supported by an international community doing amazing science in a fantastic place. I joined the DKTK from the UK 3 months ago and couldn't be happier with how easy it has been fitting in. The quality of work here is phenomenal and you should apply!
🚀 Thinking about your next big career step in science? The Int'l PhD Program at DKFZ could be a perfect fit for you. 🌍 Work in an international environment, with 500+ doctoral researchers 🔬 Do cutting-edge cancer research Curious? Join our online info session on 20 Nov. Register here: t1p.de/ws7q3
Congratulations @vakil-takhaveev.bsky.social @sturlalab.bsky.social and everyone else involved. It was really a pleasure to play a small part in it. I am looking forward to celebrating the next time we meet!
New publication alert! Click-code-seq, our DNA-damage sequencing method, is now out! This tool can advance our understanding of aging, cancer and neurodegeneration. Huge thanks to the amazing collaborative team behind this! @sturlalab.bsky.social @ethz.ch
Anna Poetsch reposted
Click-code-seq reveals strand biases of DNA oxidation and depurination in human genome. #DNAoxidation #HumanGenome @natchembio.nature.com www.nature.com/articles/s41...
Anna Poetsch reposted
It was a pleasure to talk Genome Stability for a few days with the DFG - FOR5504 for. It is really exciting to see the community in and around Cologne looking for genome stability in whole organisms and the context of the sequence. I am excited about what else is going to come.
Amazing retreat of the @dfg.de Research Unit FOR5504 on the Physiological Causes and Consequences of Genome Instability and the Institute for Genome Stability in Aging and Disease with keynotes by @apoetsch.bsky.social and @garinis.bsky.social
Anna Poetsch reposted
I am happy to share some thoughts on using AI to generate viruses (in German). www.spiegel.de/wissenschaft...
Anna Poetsch reposted
The ARD Wissenschaftsredaktion talked to me about AI generated viruses. Interested? Here you can listen to it (in German). www.swr.de/leben/gesund...
There is a new Master of Physics of Life in the house. Congratulations, Adnan! Well done! It was really a superb Defense! @poldresden.bsky.social
The ARD Wissenschaftsredaktion talked to me about AI generated viruses. Interested? Here you can listen to it (in German). www.swr.de/leben/gesund...
I am happy to share some thoughts on using AI to generate viruses (in German). www.spiegel.de/wissenschaft...
Dear CRC TRR 341, thanks for having me. It was fascinating to learn more about the genomes of plants in their ecological context!
Our 5th Internal Progress Colloquium is coming to an end! Two days full of scientific interactions. Honoured to have with us Caroline Müller (Bielefeld University) and @apoetsch.bsky.social! Our ECRs have progressed enormously and this makes us so happy!
Anna Poetsch reposted
Would you like to do some unique experiments in cancer genomics and mutagenesis, in beautiful Munich? Well then apply for this PhD position: jobs.dkfz.de/en/jobs/1679... You'll learn a lot and it'll be fun and interesting! #DKTK @dkfz.bsky.social @lmumuenchen.bsky.social
Exciting to see the @grunewaldlab.bsky.social finding new target candidates against metastases of Ewing sarcoma. It makes one wonder how general this pathway disruption might be and whether it may work with other sarcomas or metastatic cancers in general… 🤔
Very proud on our stellar Alina Ritter for her frist first-author paper: Targeting CXADR-mediated AKT signaling suppresses tumorigenesis and enhances #chemotherapy efficacy in #Ewing #sarcoma tinyurl.com/3kcs3bc9 @dkfz.bsky.social @uniheidelberg.bsky.social @nct-heidelberg.bsky.social