David A. Delgadillo

David A. Delgadillo

@daverdude.bsky.social

Organic-Natural Products-Medicinal-Analytical- Chemist. Postdoc in the Nelson Group @Caltech leveraging electron diffraction to discover natural products. Trying to do more with less. https://orcid.org/0000-0002-0897-4470

265 followers481 following16 posts

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David A. Delgadillo reposted

David A. Delgadillo reposted

Beckman Institute Spotlight: The mission of the Caltech Beckman Research Institute is to “invent methods, instrumentation, and materials that will open new avenues for fundamental research in the chemical and biological sciences, and to provide technological support” for those efforts.

David A. Delgadillo reposted

David A. Delgadillo reposted

New paper with @barriewilks.bsky.social. There are many reports on fasamycins and formicamycins (aka accramycins, naphthacemycins, streptovertimycins). Here, we unambiguously solve their structures and stereochemistry. A great effort, led by Dr Edward Hems pubs.acs.org/doi/10.1021/...

pubs.acs.orgUsing X-ray Crystallography and 1,n-ADEQUATE NMR to Revise the Structures of Highly Substituted Aromatic Natural Products: The Absolute Configuration of Formicamycin CongenersFormicamycins and their biosynthetic precursors, the fasamycins, form part of the phenylnaphthacenoid family of polyketide natural products. A recent atroposelective total synthesis of formicamycin H brought into question our original stereochemical assignment of the axially chiral linkage between C-6 and C-7. To address this, we obtained an X-ray crystal structure for formicamycin H that unambiguously confirmed our original assignment as the Sa atropisomer. X-ray structures for multiple additional fasamycins and formicamycins confirmed that this is common to all congeners. However, these studies identified a compounded error made by us whereby several structures previously reported as para-methoxy were found to have ortho-methoxy groups on the hanging E-ring. To address this for congeners that did not crystallize or gave nondiffracting crystals, we turned to the surprisingly underutilized 1,n-ADEQUATE NMR experiment. In total, we generated X-ray structures for 15 phenylnaphthacenoid metabolites and by combining these results report the corrected structures for three formicamycins, six fasamycins, and three biosynthetic lactone intermediates, noting that several revised fasamycin structures now match previously reported naphthacemycins. Our results highlight the utility of 1,n-ADEQUATE experiments for regiochemical determination in polysubstituted aromatic molecules. Moreover, our investigations uncovered a potential deracemization step during biosynthesis of the formicamycin framework.

David A. Delgadillo reposted

I’m looking for an automated way to read others’s scientific data without giving credit or acknowledgement, and also claim full credit for insights from it. And I want it to have a fitting name OAI: say no more

OpenAI {bot}@openai.xmirror.bot

Introducing GPT-Rosalind, our frontier reasoning model built to support research across biology, drug discovery, and translational medicine. Video: https://twitter.com/openai/status/2044861690911850863

1. Dodgers 2. Whoever is playing the Giants. 3. Whoever is playing the Astros.

Derek Lowe@dereklowe.bsky.social

Should we all reintroduce our baseball allegiances for a quick refresher? No explanation. 1. Cardinals 2. Red Sox 3. Whoever is playing the Astros

David A. Delgadillo reposted

My quote of the day Science is the search for truth, that is the effort to understand the world: it involves the rejection of bias, of dogma, of revelation, but not the rejection of morality. Linus Pauling

David A. Delgadillo reposted

David A. Delgadillo reposted

“The enormous diversity of fungal genomes...offers catalogs of enzymes, secondary metabolites & other parts lists for biotechnology, bioenergy & biomaterials."—Igor Grigoriev, Fungal & Algal Program Head. 🖥️🧬🍄🍄‍🟫 https://jgi.doe.gov/user-science/science-stories/mapping-earths-hidden-fungal-kingdom

jgi.doe.govMapping the Earth’s Hidden Fungal Kingdom | Joint Genome InstituteLeveraging massive comparative genomics to decode millions of mystery genes and lay a future-ready foundation

David A. Delgadillo reposted

David A. Delgadillo reposted

@dmeremin.bsky.social Absolutely crushed it with this automated workflow! It ain’t about the size of your crystals, nor the way that they look, that matters…it’s all about how they diffract! Cheers to the whole team!

Dmitry Eremin@dmeremin.bsky.social

🚨Hot off the press @jacs.acspublications.org! Your TEM can now solve crystal structures on its own. Small molecules, materials, proteins—all with one platform: REyes, the first end-to-end autonomous electron diffraction suite doi.org/10.1021/jacs... @caltechcce.bsky.social @uclacb.bsky.social

David A. Delgadillo reposted

The 2025 #NobelPrize in Chemistry has been awarded to Susumu Kitagawa, Richard Robson and Omar M. Yaghi “for the development of metal–organic frameworks.” Stay tuned for the full story to come! cen.acs.org/people/nobel... #ChemNobel #Chem #Chemistry #chemsky 🧪

cen.acs.orgThe 2025 chemistry Nobel goes to MOFsSusumu Kitagawa, Richard Robson and Omar M. Yaghi win the prize for developing metal–organic frameworks

David A. Delgadillo reposted

❄️ NEW PRE-PRINT ❄️ Happy to see our latest work online. Here we present a super simple solution to the preferred orientation problem in single particle cryo-EM: the use of ultrasonic excitation during vitrification! Details in the 🧵 below... #cryoEM #structuralbiology

bioRxiv Biophysics@biorxiv-biophys.bsky.social

Overcoming Preferred Orientation in Cryo-EM With Ultrasonic Excitation During Vitrification https://www.biorxiv.org/content/10.1101/2025.09.14.676144v1

David A. Delgadillo reposted

David A. Delgadillo reposted

ACS Council approves the petition to establish the Committee on the Advancement of LGBTQ+ Chemists, 86% to 14%. #chemsky 🧪⚗️ #acsfall2025

David A. Delgadillo reposted

Scientists’ role in defending democracy www.science.org/doi/10.1126/... Let's all support this vital need: the ability to tell the truth. 💪 "Those in the science community who are willing & able to be more visible can step up. Acting together will be more impactful than going it alone."

science.orgScientists’ role in defending democracyThe United States’ democratic leadership, commitment to freedom of expression, and investment in the pursuit of knowledge have long enabled its preeminence in science and technology. Yet today we are ...

David A. Delgadillo reposted

#ChemSky #ACSFall2025 Huge thank you to Prof. Isaiah Speight, Prof. Kensha Clark, and Prof. Davita Watkins for organizing this amazing lineup of impressive speakers. Hosted by organicdivision.org POLY and INOR. Thank you to ACS President Dr. Phillips for elevating this to a Presidential Symposium

David A. Delgadillo reposted

@acs.org is recognizing Jennifer A. Doudna with the Priestley Medal for her discoveries on ribozyme function, the Dicer RNase enzyme, double-stranded RNA processing, and CRISPR gene editing, along with her impactful international science leadership. cen.acs.org/people/award... #chemsky 🧪

cen.acs.orgJennifer Doudna is named 2026 Priestley MedalistThe award recognizes the biochemist for discoveries on ribozyme function and CRISPR gene editing, and international science leadership

David A. Delgadillo reposted

Natural products (NPs) play a crucial role in medicine, inspiring over 50% of the drugs on the market. 🔎In this work, the team used an 'arrayED' workflow, that enabled high-throughput screening for crystalline NPs amenable to microcrystal electron diffraction (microED). 🔗 ccdc-info.com/3GP4yb2

David A. Delgadillo reposted

Check out the stunning cover featuring recent paper from @hoseanelson.bsky.social Lab, led by our one and only @daverdude.bsky.social! He discovered an entire class of natural products using microED powered by arrayED @caltech.edu @caltechcce.bsky.social @uclacb.bsky.social

On the front cover of this week's issue: "Microcrystal Electron Diffraction-Guided Discovery of Fungal Metabolites" Read it here 🔗: buff.ly/F6E8Ygs #ChemSky #JACS

David A. Delgadillo reposted

New research in Science greatly expands the potential target scope of molecular glues and should stimulate the development of new small molecules that can selectively target therapeutically relevant proteins for degradation. Learn more in this week's issue: scim.ag/44uRorm

David A. Delgadillo reposted

David A. Delgadillo reposted

Crystallography legend Dorothy Crowfoot Hodgkin was born 115 years ago today. She cracked the structure of penicillin, vitamin B-12 (for which she was awarded the Nobel Prize), and ultimately, in 1969, the 788 atom structure of insulin. tinyurl.com/5n76x7n3 #WomenInSTEM #Chemistry #Physics 🧪

tinyurl.comMonarch of Crystallography: Dorothy Crowfoot Hodgkin and the Structure of Large Molecules.Two scientists.Two crystallographers.Both successful, but one died young after her most significant discovery was snatched from her, while the other lived to a ripe old age after a string of ground-br...

David A. Delgadillo reposted

This is absolute bullshit. Michael is one of the most creative scientists I've ever met, exactly the type of work the country should be investing in

Michael Baym@baym.lol

Yesterday, the NIH R35 “Outstanding Investigator” grant to fund scientists in my lab studying antibiotic resistance was terminated for reasons not related to the content of the science, or any actions taken by me or members of my lab