GenOuest

🐛 Stéphanie Robin will attend Advances in Hemipteran Research 2026 in Brussels on Oct. 29–30! Don't miss her poster: "Exploiting a pangenome graph of the pea aphid to characterize polymorphisms associated with reproductive mode variation" 🧬 More details: www.royensoc.co.uk/event/advanc...

2 stages M2 sur la plateforme en 2027 ! 🧬 2 sujets sur @atlasea.bsky.social : portails génomiques & analyse fonctionnelle 📅 Janv-juin 2027 (dates flexibles) 📍 Campus Beaulieu, Rennes 🔗 Plus d’infos & candidature : www.genouest.org/jobs/

👏Nous sommes très heureux de voir l’équipe IFB-Core-Cluster être lauréate de ce cristal collectif ! Une récompense qui souligne et valorise un travail mené depuis plusieurs années pour développer et maintenir cette infrastructure numérique distribuée.

📢 Romane, Laura & Pauline are at #JOBIM2026! 🇫🇷 🧬 Catch their posters: "Improving accessibility of MLM in bioinformatics" & "Genome annotations in @atlasea.bsky.social: using BEAURIS for their generation, FAIR handling & exploration within genomic web portals" @ifb-elixir-fr.bsky.social

🎉 Just wrapped up the @galaxyproject.bsky.social Community Conference, #GCC2026! Proud to showcase our work on the French Galaxy instance, brainstorm on future projects and do some collaborative code during the CoFest. Next year, GCC2027 is heading to Canada! 🇨🇦💻 #GalaxyCommunity

🌍 It has been a busy month for us, earlier in June we were thrilled to attend the #ELIXIR26 AHM in Lyon! 🇫🇷 Great exchanges with the community on life science data infrastructure. Always inspiring to connect with members of the #ELIXIR community! 🧬💡 @ifb-elixir-fr.bsky.social & @elixir-europe.org

📢 Service update 📢 Due to the ongoing extreme heatwave in France, we were forced to shut down all our services. We are doing our best to bring everything back ASAP, however, it is unlikely to happen before the end of the week, when temperatures will get less insane. 🫠 Thanks for your understanding!

📢 Galaxy Advanced Training: Mastering Workflows, Automation, and Scalability: pre-registration open until June 5 2026!

🙌 Earlier this week, ELIXIR organised the Biodiversity, Food Security and Pathogens workshop to bring together ELIXIR experts 🎯 to discuss future opportunities and refine the scope of projects. Read the full report on Zenodo 👉 https://loom.ly/vNtZTJo #ResearchInfrastructure

✨ GCC2026 | Clermont-Ferrand, France 🇫🇷 The Galaxy Community Conference brings together researchers, developers, trainers, and users to share their work and ideas. 📣 Submit your abstract by April 6. galaxyproject.org/events/gcc20...

📢 Lancement de la newsletter externe ABRomics ! 🦠Jusqu’à présent diffusée au consortium, la newsletter du projet ABRomics est désormais accessible à tous.

Pauline Le Corre presenting "Machine learning best practices for bioinformatics" during the Gen2Bio scientific congress in Angers. 🚀

The platform was showcased during our department day at @irisa-lab.bsky.social! We presented the platform’s carbon footprint and best practices for users! 🌱 Some of this work is done in partnership with our network, incl. @ifb-elixir-fr.bsky.social, @elixir-europe.org & @galaxyproject.bsky.social

📢 GenOuest sera présent à #Gen2Bio les 12 et 13 mars à Angers ! Retrouvez-nous pour l'atelier "Bonnes pratiques pour les modèles de machine learning et intelligence artificielle en bioinformatique" (Session 2). www.biogenouest.org/en/live-with... #Bioinformatique #IA #MachineLearning #Gen2Bio

Whether you are a longtime Galaxy user or new to the platform, this paper challenges assumptions and highlights Galaxy's versatility, scalability, and impact across disciplines. Read more about the paper, the story behind, and why it matters in our blog post: galaxyproject.org/news/2026-02...

From @bebatut.bsky.social @abretaud.bsky.social @hrhotz.bsky.social et al. in @plos.org #Computational #Biology | Ten common misconceptions about Galaxy (and why they are wrong!) | #Bioinformatics #Education #UseGalaxy 🧬 🖥️ 🧪 🔓 CC/ @galaxyproject.bsky.social ⬇️ journals.plos.org/ploscompbiol...

🎉 Time to celebrate! The Galaxy Training Network just passed 500 tutorials! Free. Open. Community-built. Reproducible. Powered by 500+ contributors worldwide, making data analysis accessible to everyone. Be sure to check out this amazing team and the GTN, here: training.galaxyproject.org

Nous recrutons!! 🚀 Un·e ingénieur·e en développement logiciel à @rennesuniv.bsky.social & @irisa-lab.bsky.social (CDD 6 mois renouvelable) Plus d'information et candidature sur univ-rennes.nous-recrutons.fr/poste/8w19o7...

Nous recrutons!! 🚀 En collaboration étroite avec l' @ifb-elixir-fr.bsky.social, nous recrutons un·e ingénieur·e devops pour travailler sur useGalaxy.fr 🇫🇷 ( @galaxyproject.bsky.social) Plus d'information et candidature sur emploi.cnrs.fr/Offres/CDD/U... 💥

Attending #BioHackathonEurope2025 organized by @elixir-europe.org in Berlin with many colleagues from @ifb-elixir-fr.bsky.social ! 🚀 5 days of collaborating work and active coding to advance on projects. 👩‍💻🧑‍💻🧬💥

@genouest.bsky.social will be present at the BioHackathon 2025 organized by @elixir-europe.org, we are looking forward this week of collaborative work 👩‍💻👨‍💻🧑‍💻

🚨🚧🖥 As a reminder, the servers will be shut down today at 14h.🚨🚧🖥 Service is expected to resume :

On Day 2 of European Galaxy Days, Anthony Bretaudeau presented 'Modern genome browsing in Galaxy with Jbrowse2'. Read more: https://usegalaxy.eu/root?tool_id=jbrowse2 #genomics #jbrowse2 #EGD2025 #genome #galaxyproject #eosc #fair #genome_browsing #open_science

We were thankful for this musical break! The Galaxy community is fun, join us!

@abretaud.bsky.social presenting JBrowse 2 that is now available in @galaxyproject.bsky.social!! 🎉🎊 Users can now visualize multiple tracks on a browser, with specific colors, metadata, and other features. Go try it out 👈 #EGD2025

On Day 1 of European Galaxy Days, Solenne Correard presented The Biodiversity Galaxy Lab: A Collaborative Hub with curated tools, workflows and training for FAIR and Reproducible biodiversity analysis. Read more: https://biodiversity.usegalaxy.fr/ #EGD2025 #workflow #biodiversity (1/2)

⚠️ Interruption du site web de la #SFBI (www.sfbi.fr) du 6 octobre 14h jusqu'à 8 octobre 14h ⚠️ ℹ️ Opération de maintenance de notre hébergeur ℹ️

@solenne-correard.bsky.social , a member of @genouest.bsky.social presented the Biodiversity Galaxy lab, now available on the French and EU instances 🎊💥 More updates to follow. Check it out: biodiversity.usegalaxy.fr #EGD2025 @galaxyproject.bsky.social

What a way to start #EGD2025! 💥 @bebatut.bsky.social presenting the microbiology Galaxy lab and the work of the mixrogalaxy community. Check out their preprint if interested 💡

Members of the @genouest.bsky.social team are on their way to the European Galaxy Days 2025! Come say Hi to us 👋

🚀 ON RECRUTE : Ingénieur·e Développeur·se – DevOps (H/F) à Rennes ! 🚀 Projet : @atlasea.bsky.social Lieu : @irisa-lab.bsky.social Compétences recherchées : 🔹 Python/Linux 🔹 Web (JS, API REST) 💡 Intéressé·e ? Postulez & partagez ! #Recrutement #DevOps #Rennes #Tech #IRISA

Today is #InternationalMicroorganismDay, a chance to celebrate the invisible powerhouses shaping our health and ecosystems. With @galaxyproject.bsky.social, we're proud to support global research that decodes the secrets of microbes, from deadly pathogens to life-sustaining bacteria.

after a long effort, gathering a lot of input from many people, we finaly put it all together: Ten Common Misconceptions About Galaxy (and Why They Are Wrong!) https://www.preprints.org/manuscript/202509.0823 Thank you very much to all people involved !

🎉 Galaxy has passed 21,000 citations on Google Scholar! A huge thank you to the global community of researchers who use and advance Galaxy for open, reproducible science.

From the #EOSC #EuroScienceGateway sustainability report : " @galaxyproject.bsky.social represents a high-impact, low-risk investment opportunity for funders, policy makers, and research institutions seeking to support open science and accelerate discovery." 💥 Full report : doi.org/10.5281/zeno...

🚀 It’s today! Mini-symposium #BYTE-Sea at #JOBIM25 on biodiversity genomics 🧬 🗣️ Talks by J.Stiller, M.Muffato, Y.Nevers, E.Parey & roundtable to shape the future of the field 💻 Join us on Zoom: us02web.zoom.us/j/8418851908... ℹ️ More info: www.atlasea.fr/en/mini-symp... 👉 See you there! #genomics

@abretaud.bsky.social and @bebatut.bsky.social presenting @galaxyproject.bsky.social France during the @ifb-elixir-fr.bsky.social network presentation at @jobim2025.bsky.social !

Come check out the poster n*141, today, from 11:30 to 12:30 at @jobim2025.bsky.social on “The Environmental Cost of Bioinformatics at @genouest.bsky.social” by Rémy Siminel and Stephanie Robin. Co-authors : Errel Le Deun, Matéo Boudet and @abretaud.bsky.social

We have 3 posters at @jobim2025.bsky.social ! The second, by Pauline Le Corre on “MLOps best practices for bioinformatics” (n° 31), will also be presented on Tuesday from 5:30 to 6:30 PM. Come check it out! Co-authors : @abretaud.bsky.social & @Yann Le Cunff

At @jobim2025.bsky.social next week? Check out Romane Libouban's poster (n°51) "Genome Annotation tooling in @galaxyproject.bsky.social : contributions of the #EuroScienceGateway project" 📆 Tuesday 5:30-6:30 PM Let's connect! Co-author : @abretaud.bsky.social

Exciting news! 🌟 This July, GenOuest will be at @jobim2025.bsky.social in Bordeaux! 📍 Are you heading to #JOBIM2025 too? Let us know, we can't wait to see you there and might even have some cool stickers for you! 😉 Stay tuned for updates on our selected poster presentations. See you soon! 🚀