Jeffrey Perkel (he/him) reposted
Jeffrey Perkel (he/him)
Jeffrey Perkel (he/him)
@jperkel.bsky.social
Technology Editor at Nature magazine (@nature.com) #rstats #scicomm. Love is love. 💕
6K followers1.3K following587 posts
Jeffrey Perkel (he/him) reposted
Figures should inform, not persuade. But can they be engaging? We argue that yes @natureportfolio.nature.com and explain 7 ways to for engage visually and reach audiences effectively and efficiently. www.nature.com/articles/s41... #DataVisualization 🧪📊 PS October = Breast Cancer Awareness 🎀
This artwork is, in part, what elevated Voet & Voet's Biochemistry textbook back when I was a grad student! (eg: www.wiley.com/en-us/shop/g...)
Irving Geis, born Oct 18, 1908, was a gifted artist who helped illuminate structural biology with his iconic images of DNA, hemoglobin, and other important macromolecules Explore his digital archive, created with permission from HHMI, at PDB-101
Jeffrey Perkel (he/him) reposted
Jeffrey Perkel (he/him) reposted
Yay, I'm so glad you're enjoying it! :) For anyone who wants to snag a copy: www.drcathicks.com#book
A very very interesting and recent book by Dr Cat Hicks ( @grimalkina.bsky.social ): Pyschology of Software Teams She makes a good case on how most companies/teams don’t understand how devs operate and think of devs as “brains in jars.” And now we have AI suddenly enter the room…
Jeffrey Perkel (he/him) reposted
Jeffrey Perkel (he/him) reposted
How much do PhD students earn? The first comprehensive overview of PhD income shows vast imbalances across much of Europe Read the full story: go.nature.com/4dJZJgt go.nature.com/4dJgCYC
Jeffrey Perkel (he/him) reposted
And they say theater kids are dramatic 🎭
Jeffrey Perkel (he/him) reposted
Thank you so much @interspecies.agency for these incredibly kind words! It is a labour of love, and I think about to get even better thanks to our new reporter James Dinneen. (Here's the sign-up page should anyone wish to take Matthew's excellent advice 😉 www.nature.com/briefing/ant...)
It is rare to find anything in the world of science writing that is so lovingly conceived and executed every week as @floragraham.bsky.social's Anthropocene briefing for Nature. Not sure how best to share a newsletter but here's trying mailchi.mp/nature/anthr... Sign up!
Jeffrey Perkel (he/him) reposted
Replying to @markarms.bsky.social
Thanks to @wudan.bsky.social for such a great conversation: niemanstoryboard.org/2026/10/16/j... #longreads #journalism #podcasts
Jeffrey Perkel (he/him) reposted
Great job everyone. Great. www.washingtonpost.com/nation/2026/...
Jeffrey Perkel (he/him) reposted
As a PhD student designing my first survey, I added what I thought was a throwaway question at the end. To my surprise, thousands of academics answered it! The paper is out today: doi.org/10.1093/pnas...
@cenmag.bsky.social's list of "10 startups to watch" includes Alta Resource Technologies, a company that uses biotech -- specifically, lanthanide-binding proteins -- to purify rare earth elements. Neat! cen.acs.org/biological-c...
Amber Dance wrote about this kind of work in 2023 in @nature.com -- check it out! 🧪 www.nature.com/articles/d41...
Jeffrey Perkel (he/him) reposted
“I do not want Claude to start telling people my research results.” New @nature.com, how researchers are using offline #LLM to analyze their data and literature libraries -- and keep them private. By David Brzostowicki. 🧪 www.nature.com/articles/d41...
Jeffrey Perkel (he/him) reposted
A scientist's LLM 'went rogue' and emailed potential collaborators on his behalf. The action advanced his project, but the ends don't justify the means. Here, the researcher explains how to apply guardrails to your #AI. New @nature.com 🧪https://www.nature.com/articles/d41586-026-02714-y
Jeffrey Perkel (he/him) reposted
I'm stunned by the news of Helen Branswell's passing. She was a force in science journalism. Gone too soon. 💔https://www.statnews.com/2026/10/13/helen-branswell-stat-reporter-obituary/
Jeffrey Perkel (he/him) reposted
We are going to miss you very much, Helen. https://www.statnews.com/2026/10/13/helen-branswell-stat-reporter-obituary/
Jeffrey Perkel (he/him) reposted
A scientist's LLM 'went rogue' and emailed potential collaborators on his behalf. The action advanced his project, but the ends don't justify the means. Here, the researcher explains how to apply guardrails to your #AI. New @nature.com 🧪https://www.nature.com/articles/d41586-026-02714-y
“I do not want Claude to start telling people my research results.” New @nature.com, how researchers are using offline #LLM to analyze their data and literature libraries -- and keep them private. By David Brzostowicki. 🧪 www.nature.com/articles/d41...
This kind of tool (see also Quarto, Jupyter Book, and Manubot) is so cool -- and nicely solves the problem of incorrect values in a manuscript! (cc @casey.greenelab.com )
🚀 Rxiv-Maker is now peer-reviewed and open access! Write your manuscript in Markdown and get a typeset PDF or an editable Word file, with figures, citations and cross-references numbered for you. Led by Bruno Saraiva, with @guijacquemet.bsky.social's lab 🔬 doi.org/10.1242/jcs.265183
Shameless plug: I wrote about this class of tools for @nature.com in 2022. Check it out 🧪: www.nature.com/articles/d41...
Jeffrey Perkel (he/him) reposted
From @propublica.org: Experts have long warned that immigration dragnets and the erosion of civil rights for immigrants will inevitably result in the erosion of rights for citizens. The Trump administration has detained 506 US citizens against their will. projects.propublica.org/american-cit...
Jeffrey Perkel (he/him) reposted
Jeffrey Perkel (he/him) reposted
Margaret Hamilton, the first female programmer hired to work on the Apollo project who ultimately led the 100-person team that guided Armstrong and Aldrin to a safe landing on the moon, dies at 90. www.nytimes.com/2026/10/07/o...
Jeffrey Perkel (he/him) reposted
another year where all the science nobels went to men, as was the case in 2024 much of this piece, about the structural barriers women face in doing innovative research and receiving credit for it, holds up (I think) www.statnews.com/2024/10/11/n...
“Rather than fight this tug of war that exists between what cells want to do and what we as engineers want to do, we kind of just cut the rope.” New @nature.com, how researchers are refining cell-free protein expression systems to advance synthetic bio & other apps. 🧪 www.nature.com/articles/d41...
Jeffrey Perkel (he/him) reposted
🏁 That's a wrap! The @biohub.org Cell Tracking machine learning challenge on @kaggle.com is over: 4,478 participants, 3,947 teams, 120 countries, 95,438 submissions, tracking every cell of zebrafish embryos. 🧪🔬🧵 kaggle.com/competition... #microscopy
This is neat: a #webR - based (WebAssembly) package (📦) to convert an RStudio workspace into a static web page that allows anyone to try your code without installation. #rstats 🧪 blog.thecoatlessprofessor.com/posts/introd... (ht @richvn.bsky.social)
Shameless plug: I wrote about WebAssembly @nature.com in 2024 -- very cool, if complicated, technology! www.nature.com/articles/d41...
Gotta name them all! 👩🔬🧪 by @richvn.bsky.social @nature.com
Can you name the women who have won a science Nobel prize? Take Nature’s quiz on female Nobel laureates in physics, chemistry or physiology or medicine. www.nature.com/articles/d41...
For the science feed. 🧪 By @heidiledford.bsky.social @nature.com
Bigger than CRISPR? A guide to the latest genome editors #Science https://www.nature.com/articles/d41586-026-02964-w
Jeffrey Perkel (he/him) reposted
Department of Chemistry at Oregon State University is hiring a tenure-track physical chemist at the assistant or associate professor level @chemjobber.bsky.social oregonstate.wd501.myworkdayjobs.com/en-US/OSU_Ca...
"Co-Scientist combed thru 700+ papers and generated 108 possible strategies. It rejected all but one as unworkable. The last strategy turned the lab’s thinking on its head." New @nature.com, how #AI co-scientists are upending the way research is done. By Elie Dolgin 🧪 www.nature.com/articles/d41...
Jeffrey Perkel (he/him) reposted
Jeffrey Perkel (he/him) reposted
The irony of it all Yesterday, @NEJM posted a new essay suggesting that the US government attacks on biomedical science will subside. www.nejm.org/doi/full/10.... On the same day, it was announced the President wants control of NIH funding
Jeffrey Perkel (he/him) reposted
Due to funding concerns, @cos.io's Open Science Framework will no longer allow researchers to post their code and data on the platform from 16 November onwards. My latest for @nature.com: www.nature.com/articles/d41... @briannosek.bsky.social, @katiecorker.bsky.social
Jeffrey Perkel (he/him) reposted
Jeffrey Perkel (he/him) reposted
Jeffrey Perkel (he/him) reposted
The policy change was “necessitated because of financial realities”, says @briannosek.bsky.social: it costs US$4-5 million annually to manage the OSF. New @nature.com, @cos.io to stop hosting data & code, plus private data, from 16 Nov. By @dalmeet.bsky.social 🧪 www.nature.com/articles/d41...
The policy change was “necessitated because of financial realities”, says @briannosek.bsky.social: it costs US$4-5 million annually to manage the OSF. New @nature.com, @cos.io to stop hosting data & code, plus private data, from 16 Nov. By @dalmeet.bsky.social 🧪 www.nature.com/articles/d41...
Protein biologists once dismissed #single-cell #proteomics as sci-fi. But now the tech is not only possible but practical — and scientifically informative. By @eisensteinium.bsky.social, feat. @slavov-n.bsky.social @mannlab.bsky.social & more @nature.com 🧪🦠 www.nature.com/articles/d41...
This is so cool: researchers studying ancient parchments as biological objects uncover the hidden history of sheeppox virus. 📚🦠🧪. From @science.org @andrewcurry.com www.science.org/content/arti...
PS: This kind of research is called 'biocodicology', and @marlabroadfoot.bsky.social had a brilliant feature on it earlier this year @nature.com 🧪 www.nature.com/articles/d41...