Juan Nunez-Iglesias reposted
Juan Nunez-Iglesias
Juan Nunez-Iglesias
@jni.codes
Co-founder, core developer, and steering council member of @napari.org Also other FOSSy and Science-y things. I prefer Mastodon (profile at https://fosstodon.org/@jni) but begrudgingly checking things out here. 😂
343 followers208 following243 posts
Juan Nunez-Iglesias reposted
So @igalia.com and friends are slowly but surely turning Servo into a web-compatible browser. This would be a singular feat of engineering whose side effects throughout the process at Mozilla and Igalia have made computing better for everybody. servo.org/blog/2026/10... wpt.fyi/results/?lab...
Juan Nunez-Iglesias reposted
Conda, Mamba and Pixi users: update your tools and CA packages after the eMudhra certificate compromise. Follow the instructions for your installation, including existing environments: buff.ly/Oq9uv0w
Juan Nunez-Iglesias reposted
Replying to @meeranair.bsky.social
Jim Balsillie: ".... Foundational IP for AI that Canadian taxpayers funded for two decades is transferred from U of T to Google, who thanked Canada for it and said, 'We now use it throughout our entire business and it’s a major driver of our corporate success.'” sencanada.ca/Content/SEN/...
Juan Nunez-Iglesias reposted
🎉 New preprint! We built a fully open-source, 3D-printable droplet microfluidics platform with strobe-enhanced microscopy — sharp images of fast-moving droplets without a high-speed camera. All files on GitHub. #Microfluidics #OpenHardware 🔗 biorxiv.org/content/10.64898/2026.10.19.758223v1
Juan Nunez-Iglesias reposted
It's fall, which means it's bioimage analysis conference season! @erinweisbart.bsky.social and @bethcimini.bsky.social had SUCH fun at the @bioimagingna.bsky.social/I2K #I2kxBINA2026meeting last month. We HAD to take advantage of being in person together to film on-site with our friends! (1/2)
Image corrections might not be the answer to EVERYTHING, but in Ep 42, we discuss how they might be the answer to "improving your measurements enough to measure the thing you care about". @bethcimini.bsky.social and @erinweisbart.bsky.social discuss what, when, and why!
Juan Nunez-Iglesias reposted
I'll be speaking at the Open Bioimaging Practices meetup tomorrow - join us if you're curious about (3D) multiplexed protein image analysis! 🔬
Do you want to learn about multiplexed image analysis using OME-Zarr? Tomorrow, @rhornb.bsky.social , @nrepina.bsky.social & Flurin Sturzenegger will share their learnings about building workflows around multiplexed image analysis, see www.biovisioncenter.uzh.ch/en/events/Up...
Juan Nunez-Iglesias reposted
Do you want to learn about multiplexed image analysis using OME-Zarr? Tomorrow, @rhornb.bsky.social , @nrepina.bsky.social & Flurin Sturzenegger will share their learnings about building workflows around multiplexed image analysis, see www.biovisioncenter.uzh.ch/en/events/Up...
Juan Nunez-Iglesias reposted
After sitting on the account for a few years, I finally set up an affiliate link on Bookshop.org -- if you use this link to pre-order my new book, you both support independent bookstores and give me a bit of an extra boost! bookshop.org/a/104234/978...
Juan Nunez-Iglesias reposted
Juan Nunez-Iglesias reposted
A month ago, I found myself in the unexpected position of founding an AI startup. Today, the Inference Co-op adopted its first real governance charter. We can't make AI good, but we can own our choices, and make them together. Want to join? https://inference.coop
Juan Nunez-Iglesias reposted
#HappyFluorescenceFriday #microscopycommunity - Congrats to the winner of the Wayne S. Rasband Open Source Imaging Award! Wayne S. Rasband Open Source Imaging Award – Curtis Rueden Learn more: buff.ly/hwKCCwU
Juan Nunez-Iglesias reposted
The State of the Map Latin America conference happens Oct 27-29 in Mexico City. If you want to help participants to find their way around town, do your OSM contributions before the 25th! We will give a talk and distribute some of our stickers. Want to meet? Reach out! www.comaps.app/community/
Juan Nunez-Iglesias reposted
We took a break from advertising these but we are still holding weekly OME-Zarr office hours! Ask @jni.codes or @joshmoore.bsky.social anything about OME-Zarr on Thu Oct 22 at 9am Paris / 12:30pm Delhi / 6pm Sydney. Full details and zoom link at: ngff.openmicroscopy.org/community#of...
We're excited to help organize the OME-Zarr Office Hours with a new rotating schedule starting today! 🎉 Whether you're using OME-Zarr today or just curious to learn more, we'd love to see you there. 📅 Full schedule: ngff.openmicroscopy.org/community
Juan Nunez-Iglesias reposted
📝 One of my arguments against putting icons in every menu item was: “Apple doesn’t do it!” Then they started doing it. Now they’ve stopped doing it. Now I can say, ‘Even Apple tried doing it, and now they say “Don’t”.’ What more could I wish for? blog.jim-nielsen.com/2026/icons-i...
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Grant peer review costs a lot: ~$40k per application in reviewer time, with proposals reviewed again and again. In @thetransmitter.bsky.social , I propose a partial lottery: reviewers decide pass/fail, chance picks among the passes, and "unmissable" ideas and ECRs get protected routes.
Juan Nunez-Iglesias reposted
The flies arrived in Cambridge this morning—healthy and happy! So nice to see another successful shipment! And great to draw one of our all-time-best customers out of retirement long enough to recreate our first order! Here’s to another 40 years of the BDSC helping to make fly genetics happen!
40 years ago today, the BDSC made its 1st shipment. To celebrate, Trudy Kaufman, who packed the 1st shipment, boxed up the same kinds of flies for John Roote at Cambridge, who placed the 1st order. Watch for pics of the arrival next week. We’ve shipped 4,882,378 vials total. That’s a lot of flies!
Juan Nunez-Iglesias reposted
We are glad to announce that the @dfg.de has funded our #BioImageNet proposal! 🤩
Juan Nunez-Iglesias reposted
[1/4] I joined the @subvert.fm co-op earlier this year before it went live. This is the cute little zine package I was sent. I decided to boycott Bandcamp purchasing when Subvert launched, so I will no longer buy any music (or merch) from Bandcamp for as long as Subvert remains a viable alternative.
Juan Nunez-Iglesias reposted
Haven't done an animation in a while. Lucky for me @amsikking.bsky.social came up with a "Dual-Grind" snouty light sheet objective - amsikking.github.io/idv-snouty_l.... I happily present a look into their manufacture.
Juan Nunez-Iglesias reposted
Juan Nunez-Iglesias reposted
Our movie won at the @inp-marseille.bsky.social retreat! Behold NeuroCyto's latest blockbuster: "Neuronal culture is a piece of cake" 🍰
Juan Nunez-Iglesias reposted
Today I replied to an e-mail from a friend I really like, who is awesome and cool and whose e-mails I love to receive. I had been wanting to respond for a while but somehow just… did not. The e-mail I replied to was sent in January, 2024. Why am I like this.
Juan Nunez-Iglesias reposted
I warmly recommend this job opportunity with the Image Analysis Hub and Jean-Yves at Institut Pasteur. It’s an amazing team and a fantastic, collaborative environment that gives you the opportunity to support others while being equally supported and valued.
We have a position open in our core facility in the @pasteur.fr . Please share it and / or apply! forum.image.sc/t/research-e...
Juan Nunez-Iglesias reposted
Juan Nunez-Iglesias reposted
Python 3.15 is OUT 🐍🚀 Lazy imports, Tachyon in the stdlib, frame pointers on by default, frozendict, better error messages... this one is LOADED 🔥🔥🔥 Go upgrade 🤘 discuss.python.org/t/python-3-1...
Juan Nunez-Iglesias reposted
Tenure track assistant/associate professor positions open in my university. Within life sciences, INCLUDING PLANT SCIENCES. Please RT jobs.helsinki.fi/job/Helsinki...
Juan Nunez-Iglesias reposted
Juan Nunez-Iglesias reposted
ATTN: The first round of applications for the napari developers-in-residence closes October 13th 11:59pm AoE. ⏰ We appreciate the great response, so finish up those applications! There may be a second round which we'd also announce on socials. 📖 Read more & apply: napari.org/island-dispa...
Juan Nunez-Iglesias reposted
Juan Nunez-Iglesias reposted
Juan Nunez-Iglesias reposted
🏁 That's a wrap! The @biohub.org Cell Tracking machine learning challenge on @kaggle.com is over: 4,478 participants, 3,947 teams, 120 countries, 95,438 submissions, tracking every cell of zebrafish embryos. 🧪🔬🧵 kaggle.com/competition... #microscopy
Juan Nunez-Iglesias reposted
Curious to see what a malaria parasite looks like during different stages of cytokinesis? 🫣 In this month’s @nfdi4bioimage.bsky.social calendar, we present a dataset of Plasmodium falciparum in EMPIAR and available as OME-Zarr via the @bioimagearchive.bsky.social, both hosted by @ebi.embl.org.
Juan Nunez-Iglesias reposted
We have a position open in our core facility in the @pasteur.fr . Please share it and / or apply! forum.image.sc/t/research-e...
Juan Nunez-Iglesias reposted
Replying to @nodus-agent.bsky.social
Yes, this is what they are working on (led by @dholms.at ) and what is to be released next month: atproto.com/blog/atproto...
Juan Nunez-Iglesias reposted
Preprint is out! Our BakingTray software turns a 2-photon microscope into a serial-section tomography system for automated whole-organ imaging. ~€35k to convert an existing scope. 11 systems worldwide, >7,000 samples at SWC alone #neuroskyence #microscopy www.biorxiv.org/content/10.6...
Great thread. Dripping with sarcasm, but still manages to heartily celebrate the importance of human contribution and connection in (specifically game development but generally) any creative endeavour.
"AI lets you focus on the higher level ideas!!" because we all grew up dreaming of becoming managers and CEOs we all know the real artists at the very highest level are the shareholders, famously full of amazing ideas
Juan Nunez-Iglesias reposted
sometimes it feels like a lot of normal people conceptualize an "artist" as a superposition of both A. a super wealthy fine art elite who does low effort abstract art nobody understands B. someone magically born with the art talent gene even though A is 0.000001% of artists and B is not a thing
Or when they crank the prices up. I got into a fight with someone on linkedin saying basically “animators have enjoyed their cushy existence for too long and now they are scared about ai” i was like ah yes the famously stable life of the illustrious animator
Juan Nunez-Iglesias reposted
Me? With my claws and teeth I will will defend art and artists as essential to any version of a beautiful livable world. a-rabbitsfoot.com/editorial/co...
Juan Nunez-Iglesias reposted
Juan Nunez-Iglesias reposted
Last call for abstracts (deadline Tue Oct 6) for the 29th Australian Conference on Microscopy & Microanalysis! www.acmm29.org Feb 1-4, 2027 in Sydney, Australia! 🐨 #ACMM29
Juan Nunez-Iglesias reposted
Just released the napari-clusters-plotter 0.11.0 github.com/BiAPoL/napar..., a little passion-project of mine for interactive exploration of datasets and attached features in @napari.org Two cool things to take note of 👇
Juan Nunez-Iglesias reposted
Hi all, prototype of a napari-zenapi-streaming plugin is working using @zeiss-microscopy.bsky.social and @napari.org. - stream pixels from ZEN into multi-dim array and display live - stream pixels from ZEN directly into OME-ZARR (see video) For viewing I used: find-nuclei.github.io
Juan Nunez-Iglesias reposted
Juan Nunez-Iglesias reposted
I went to Geneva a few weeks ago and spoke on a panel about the nature of time for a Geneva Watch Days event. While I was there, on a lark, I entered a competition to most precisely calibrate a Swiss watch. And today I found out that I won! 😃 www.instagram.com/reel/Dd6hUTB...
Juan Nunez-Iglesias reposted
It's @perlman.bsky.social representing the @image.coop at #i2kbina2026!