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Jeff Martin
Jeff Martin
@jeff.cuchazinteractive.org
Making a better internet for myself and friends. Software engineer working in academia, and on my own tools, in Rust, Kotlin, Mojo, Python, Javascript, and more. Works on nextPYP: software for analyzing CryoET (and EM) data from your web browser.
107 followers87 following276 posts
Jeff Martin reposted
Jeff Martin reposted
Explore images that structural biologist Irina Bezsonova (UCONN Health) created for #inktober in PDB-101's #sciart gallery
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Genentech Structural Biology is hiring a Principal Scientist - please share! We're looking for someone with expertise in solving structures and in computational techniques related to dynamics - MD, ensemble modeling, ensemble docking, and/or related methods.
Jeff Martin reposted
Interested in a career in industry cryoEM? We're hiring! We seek a cryoEM/cryoET expert to join our team at Genentech advance our mission to provide high-resolution structural insights into biological macromolecules involved in health and disease. Apply at: careers.gene.com/us/en/job/20...
Jeff Martin reposted
Jeff Martin reposted
This is one of those jokes you make, then realize people in the field have probably been saying it verbatim for 20 years. COMIC ◆ www.smbc-comics.com/comic/ai-17 PATREON ◆ www.patreon.com/ZachWeinersm... STORE ◆ smbc-store.myshopify.com
Jeff Martin reposted
Jeff Martin reposted
Excited to share that my 2025 collection of science-inspired drawings is now live on the Protein Data Bank (PDB) website. Thank you @rcsbpdb.bsky.social! It is free to explore and download. I’d love to hear what you think! pdb101.rcsb.org/sci-art/bezs...
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I’ve posted it before, but it feels evergreen The two hardest problems in Computer Science are 1. Human communication 2. Getting people in tech to believe that human communication is important
I think we need an inverse thread where we talk about things that normal intelligent people universally agree upon that are for some reason hot takes within your profession
Jeff Martin reposted
Jeff Martin reposted
The employer class is trying to get rid of the employee class.
The US is now building more data centers than office buildings for the first time Spending on data centers hit a record high of nearly $47B/yr in data released today, up 31% over the last year, as office construction keeps falling Also, I'm aware this graph looks like Kentucky
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“think about whether some of the proprietary license money you’re currently spending could be spent instead on open solutions that would be yours forever, endlessly adaptable, and benefit the entire world. And please get in touch by emailing info@image.coop” 👏 👏 👏 Can’t wait to see where this goes
Hello, world! We are starting a worker cooperative to build, maintain, teach, and support open source scientific imaging software. image.coop/blog/posts/2...
Jeff Martin reposted
Jeff Martin reposted
I had a number of CS people tell me this read just fine for them. www.smbc-comics.com/comic/language
Jeff Martin reposted
Jeff Martin reposted
Please spread the word: the Structural Studies Division @mrclmb.bsky.social is looking for a new tenure-track, independent group leader with an exciting plan in any area of Structural (Molecular & Cell) biology, in discovery biology and/or methods development. 🥳 mrc.tal.net/vx/mobile-0/...
I brewed my first homebrew beer in nine years today! Damn, it's been a while. It's a dark English mild. If breweries won't make the beers I like anymore, guess I'll do it myself. If you're interested, read more on my other account. Since I'm too lazy to copy it here. gladtech.social/@cuchaz/1160...
Jeff Martin reposted
Jeff Martin reposted
Jeff Martin reposted
First Scientific Computing in Rust monthly newsletter of 2026 is out. Enjoy! scientificcomputing.rs/monthly/2026...
Jeff Martin reposted
Jeff Martin reposted
CryoEM folks, If you want to handle huge STAR file efficiently in Python, please try starfile-rs! github.com/hanjinliu/star… Reading a motion data of a particle from a 15 MB file is just like this ↓🤩
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Day 18: Function with fast & slow paths. Inline = code bloat. Don't inline = slow fast path. Can't have both—or can you? The compiler finds a surprising way out of this dilemma. xania.org/202512/18-pa... youtu.be/STZb5K5sPDs #AoCO2025
Jeff Martin reposted
Take a look under the hood of the state of the art in grid interpolation in Rust and Python! Come for the compile-time loop unrolling, stay for the profile-guided optimization! jlogan.dev/blog/2025/11...
InterpN: Fast Interpolation, using Rust jlogan.dev/blog/2025/11... Cool story about how to go fast with numerical computing. And why many Pythonic approaches, even with native extensions, can be pretty slow. My first thought though: can we go faster in Mojo? 😅
Jeff Martin reposted
Jeff Martin reposted
Really positive sign that open source projects are standing up to do the right thing. Kudos to the Python folks: www.theregister.com/2025/10/27/p...
Jeff Martin reposted
We are looking for a computational postdoc to work with us on new optimisation algorithms to make #RELION even better. Join our bubbly team at the @mrclmb.bsky.social in Cambridge, UK. 🤗 RTs appreciated. mrc.tal.net/vx/appcentre...
PSA for my friends who play games on Windows: Microsoft now screenshots your games and sends the images to the cloud for AI stuff, and who knows what else. If this bothers you, you can turn it off (for now). Or you can switch to a different OS, like Linux or Mac. www.techspot.com/news/109983-...
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October issue is now available! journals.iucr.org/d/issues/202... The cover highlights the article on categorizing prediction modes within low-pLDDT regions of AlphaFold2 structures from the Richardson lab @duke-university.bsky.social : doi.org/10.1107/S205... Image credit: Chistopher Williams
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Happy 10 year anniversary to this tweet! Has memory safety in C++ been solved yet? x.com/CppCon/statu...
Jeff Martin reposted
Replying to @filippo.abyssdomain.expert
A "fun" issue my professional communities are dealing with recently is where to hold conferences, if non-US people can't safely enter the US, and foreigners in the US can't safely leave it. There is no good answer, and the equilibrium is having fewer foreigners AND conferences in the US.
Woo! My lab's Nature Protocols paper is out today. In a nutshell, the protocol shows how to use our Cryo-ET software to solve high-res protein structures. I don't think any of the other authors are here, but congrats to Hsuan-Fu, Ye, and Wendy for all of their work! www.nature.com/articles/s41...
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😍 Eng manager job working on storage APIs, workers, etc for Firefox. Relevant to improving local-first apps in the browser! www.mozilla.org/en-US/career...
Jeff Martin reposted